Back to Multiple platform build/check report for BioC 3.11
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for CellScore on tokay2

This page was generated on 2020-10-17 11:56:13 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE CellScore PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 255/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellScore 1.8.0
Nancy Mah
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/CellScore
Branch: RELEASE_3_11
Last Commit: 796a585
Last Changed Date: 2020-04-27 15:13:55 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CellScore
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CellScore_1.8.0.tar.gz && rm -rf CellScore.buildbin-libdir && mkdir CellScore.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CellScore.buildbin-libdir CellScore_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CellScore_1.8.0.zip && rm CellScore_1.8.0.tar.gz CellScore_1.8.0.zip
StartedAt: 2020-10-16 17:10:36 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:11:18 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 41.6 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CellScore_1.8.0.tar.gz && rm -rf CellScore.buildbin-libdir && mkdir CellScore.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CellScore.buildbin-libdir CellScore_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CellScore_1.8.0.zip && rm CellScore_1.8.0.tar.gz CellScore_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 4211k    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 4211k  100 4211k    0     0  14.3M      0 --:--:-- --:--:-- --:--:-- 14.6M

install for i386

* installing *source* package 'CellScore' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CellScore'
    finding HTML links ... done
    BarplotOnOff                            html  
    BoxplotCellScore                        html  
    CellScore                               html  
    CellScoreReport                         html  
    CosineSimScore                          html  
    OnOff                                   html  
    PcaStandards                            html  
    PlotCosineSimHeatmap                    html  
    RugplotCellScore                        html  
    ScatterplotCellScoreComponents          html  
    extractTransitions                      html  
    heatmapOnOffMarkers                     html  
    rugplotDonorTargetTest                  html  
    scatterplotDonorTargetTest              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CellScore' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CellScore' as CellScore_1.8.0.zip
* DONE (CellScore)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'CellScore' successfully unpacked and MD5 sums checked