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INSTALL report for AffiXcan on tokay2

This page was generated on 2020-10-17 11:56:03 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE AffiXcan PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 21/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AffiXcan 1.6.0
Alessandro Lussana
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/AffiXcan
Branch: RELEASE_3_11
Last Commit: 930d85d
Last Changed Date: 2020-04-27 15:20:00 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: AffiXcan
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/AffiXcan_1.6.0.tar.gz && rm -rf AffiXcan.buildbin-libdir && mkdir AffiXcan.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AffiXcan.buildbin-libdir AffiXcan_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL AffiXcan_1.6.0.zip && rm AffiXcan_1.6.0.tar.gz AffiXcan_1.6.0.zip
StartedAt: 2020-10-16 18:43:46 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:44:56 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 70.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/AffiXcan_1.6.0.tar.gz && rm -rf AffiXcan.buildbin-libdir && mkdir AffiXcan.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AffiXcan.buildbin-libdir AffiXcan_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL AffiXcan_1.6.0.zip && rm AffiXcan_1.6.0.tar.gz AffiXcan_1.6.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1710k  100 1710k    0     0  22.3M      0 --:--:-- --:--:-- --:--:-- 24.5M

install for i386

* installing *source* package 'AffiXcan' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'AffiXcan'
    finding HTML links ... done
    AffiXcan-package                        html  
    affiXcanBs                              html  
    affiXcanGReX                            html  
    affiXcanImpute                          html  
    affiXcanPca                             html  
    affiXcanPcs                             html  
    affiXcanTrain                           html  
    assoc2list                              html  
    computeBs                               html  
    computeCorrelation                      html  
    computeExpr                             html  
    computePca                              html  
    computePcs                              html  
    computeRSquared                         html  
    exprMatrix                              html  
    overlookRegions                         html  
    regionAssoc                             html  
    subsetKFold                             html  
    trainingCovariates                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'AffiXcan' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'AffiXcan' as AffiXcan_1.6.0.zip
* DONE (AffiXcan)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'AffiXcan' successfully unpacked and MD5 sums checked