Beth Signal
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/branchpointer |
| Branch: RELEASE_3_10 |
| Last Commit: e00ca01 |
| Last Changed Date: 2019-10-29 13:10:18 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:28:08 -0400 (Wed, 15 Apr 2020).
| Package 196/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| branchpointer 1.12.0 Beth Signal
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: branchpointer |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/branchpointer_1.12.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.12.0.zip && rm branchpointer_1.12.0.tar.gz branchpointer_1.12.0.zip |
| StartedAt: 2020-04-14 20:10:50 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 20:12:55 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 125.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/branchpointer_1.12.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.12.0.zip && rm branchpointer_1.12.0.tar.gz branchpointer_1.12.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
60 4716k 60 2864k 0 0 31.3M 0 --:--:-- --:--:-- --:--:-- 32.5M
100 4716k 100 4716k 0 0 43.7M 0 --:--:-- --:--:-- --:--:-- 45.1M
install for i386
* installing *source* package 'branchpointer' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'branchpointer'
finding HTML links ... done
exonsToIntrons html
getBranchpointSequence html
getCanonical3SS html
getExonDists html
getPPT html
getQueryLoc html
gtfToExons html
makeBranchpointWindowForExons html
makeBranchpointWindowForSNP html
plotBranchpointWindow html
plotStructure html
predictBranchpoints html
predictionsToSummary html
readQueryFile html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'branchpointer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'branchpointer' as branchpointer_1.12.0.zip
* DONE (branchpointer)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'branchpointer' successfully unpacked and MD5 sums checked