Back to the "Multiple platform build/check report"

BioC experimental data: CHECK report for geneLenDataBase on petty

This page was generated on 2015-10-07 16:21:39 -0700 (Wed, 07 Oct 2015).

Package 95/241HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
geneLenDataBase 1.4.0
Nadia Davidson
Snapshot Date: 2015-10-07 07:15:35 -0700 (Wed, 07 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_1/experiment/pkgs/geneLenDataBase
Last Changed Rev: 3279 / Revision: 3442
Last Changed Date: 2015-04-16 13:16:53 -0700 (Thu, 16 Apr 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  WARNINGS  OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK [ WARNINGS ] OK 

Summary

Package: geneLenDataBase
Version: 1.4.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings geneLenDataBase_1.4.0.tar.gz
StartedAt: 2015-10-07 09:23:33 -0700 (Wed, 07 Oct 2015)
EndedAt: 2015-10-07 09:30:11 -0700 (Wed, 07 Oct 2015)
EllapsedTime: 398.1 seconds
RetCode: 0
Status:  WARNINGS 
CheckDir: geneLenDataBase.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings geneLenDataBase_1.4.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.1-data-experiment/meat/geneLenDataBase.Rcheck’
* using R version 3.2.2 Patched (2015-08-14 r69078)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘geneLenDataBase/DESCRIPTION’ ... OK
* this is package ‘geneLenDataBase’ version ‘1.4.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘geneLenDataBase’ can be installed ... [22s/25s] OK
* checking installed package size ... NOTE
  installed size is 100.3Mb
  sub-directories of 1Mb or more:
    data  99.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
':::' call which should be '::': ‘GenomicFeatures:::supportedUCSCtables’
  See the note in ?`:::` about the use of this operator.
Unexported object imported by a ':::' call: ‘GenomicFeatures:::.UCSC_TXNAME2GENEID_MAPDEFS’
  See the note in ?`:::` about the use of this operator.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... WARNING
Missing link or links in documentation object 'anoCar1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoCar1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoCar1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoGam1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoGam1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'anoGam1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'apiMel2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'aplCal1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau2.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau3.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'bosTau4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'braFlo1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caeJap1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caePb1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caePb2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caeRem2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'caeRem3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'calJac1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'calJac1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'calJac1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'canFam2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cavPor3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cb1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'cb3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce4.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ce6.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ci2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.vegaGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer5.vegaPseudoGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'danRer6.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm3.nscanPasaGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dm3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'dp3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droAna2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droEre1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droEre1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droGri1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droGri1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droMoj2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droPer1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droPer1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSec1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSec1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSim1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSim1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droSim1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droVir2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'droYak2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab1.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'equCab2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'felCat3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'fr1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'fr1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'fr2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal2.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'galGal3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'gasAcu1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'gasAcu1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg16.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.acescan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.vegaGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.vegaPseudoGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg17.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.acescan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.knownGeneOld3.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.sibGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg18.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'hg19.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'loxAfr3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm7.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.sibGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm8.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.acembly.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.ccdsGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.exoniphy.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'mm9.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom4.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'monDom5.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ornAna1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'oryLat2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'panTro2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'petMar1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'ponAbe2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'priPac1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rheMac2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn3.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.knownGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.sgpGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'rn4.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'sacCer1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'sacCer2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'strPur2.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'taeGut1.xenoRefGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.geneid.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig1.nscanGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'tetNig2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro1.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.ensGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.geneSymbol.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.genscan.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object 'xenTro2.refGene.LENGTH.Rd':
  ‘downloadLengthFromUCSC’

See section 'Cross-references' in the 'Writing R Extensions' manual.

* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [89s/91s] OK
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  ‘/Users/biocbuild/bbs-3.1-data-experiment/meat/geneLenDataBase.Rcheck/00check.log’
for details.


geneLenDataBase.Rcheck/00install.out:

* installing *source* package ‘geneLenDataBase’ ...
** R
** data
** preparing package for lazy loading
Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’
* DONE (geneLenDataBase)

geneLenDataBase.Rcheck/geneLenDataBase-Ex.timings:

nameusersystemelapsed
anoCar1.ensGene.LENGTH0.1850.0040.189
anoCar1.genscan.LENGTH0.0700.0020.071
anoCar1.xenoRefGene.LENGTH2.0120.0162.027
anoGam1.ensGene.LENGTH0.1320.0040.135
anoGam1.geneid.LENGTH0.0700.0030.073
anoGam1.genscan.LENGTH0.0640.0020.066
apiMel1.genscan.LENGTH0.0550.0020.057
apiMel2.ensGene.LENGTH0.1620.0030.164
apiMel2.geneid.LENGTH0.0690.0010.070
apiMel2.genscan.LENGTH0.0490.0010.050
aplCal1.xenoRefGene.LENGTH0.7390.0050.745
bosTau2.geneSymbol.LENGTH0.0660.0010.067
bosTau2.geneid.LENGTH0.6660.0040.670
bosTau2.genscan.LENGTH0.1200.0020.122
bosTau2.refGene.LENGTH0.0600.0010.061
bosTau2.sgpGene.LENGTH0.1500.0020.153
bosTau3.ensGene.LENGTH0.1720.0050.177
bosTau3.geneSymbol.LENGTH0.0520.0020.053
bosTau3.geneid.LENGTH0.2460.0040.250
bosTau3.genscan.LENGTH0.1080.0010.109
bosTau3.refGene.LENGTH0.0530.0010.054
bosTau3.sgpGene.LENGTH0.1400.0010.142
bosTau4.ensGene.LENGTH0.1650.0030.168
bosTau4.geneSymbol.LENGTH0.1420.0030.145
bosTau4.genscan.LENGTH0.1450.0030.149
bosTau4.nscanGene.LENGTH0.0470.0010.049
bosTau4.refGene.LENGTH0.0500.0010.051
braFlo1.xenoRefGene.LENGTH0.6340.0040.638
caeJap1.xenoRefGene.LENGTH0.6490.0030.652
caePb1.xenoRefGene.LENGTH1.2050.0041.209
caePb2.xenoRefGene.LENGTH0.7810.0050.786
caeRem2.xenoRefGene.LENGTH0.5920.0050.598
caeRem3.xenoRefGene.LENGTH0.5720.0040.577
calJac1.genscan.LENGTH0.1210.0020.123
calJac1.nscanGene.LENGTH0.1900.0020.191
calJac1.xenoRefGene.LENGTH1.1490.0161.294
canFam1.ensGene.LENGTH0.1710.0010.173
canFam1.geneSymbol.LENGTH0.0100.0000.011
canFam1.genscan.LENGTH0.1630.0030.167
canFam1.nscanGene.LENGTH0.0900.0020.093
canFam1.refGene.LENGTH0.0100.0010.011
canFam1.xenoRefGene.LENGTH0.9070.0050.912
canFam2.ensGene.LENGTH0.1930.0040.198
canFam2.geneSymbol.LENGTH0.0110.0010.011
canFam2.genscan.LENGTH0.0950.0020.096
canFam2.nscanGene.LENGTH0.0980.0030.101
canFam2.refGene.LENGTH0.0110.0010.012
canFam2.xenoRefGene.LENGTH1.0970.0071.103
cavPor3.ensGene.LENGTH0.1500.0020.151
cavPor3.genscan.LENGTH0.1500.0010.151
cavPor3.nscanGene.LENGTH0.0980.0030.101
cavPor3.xenoRefGene.LENGTH1.6290.0091.638
cb1.xenoRefGene.LENGTH0.6150.0020.618
cb3.xenoRefGene.LENGTH0.5350.0050.539
ce2.geneSymbol.LENGTH0.0990.0010.099
ce2.geneid.LENGTH0.0870.0010.088
ce2.refGene.LENGTH0.0980.0010.099
ce4.geneSymbol.LENGTH0.1030.0010.105
ce4.refGene.LENGTH0.0980.0020.100
ce4.xenoRefGene.LENGTH0.1170.0020.120
ce6.ensGene.LENGTH0.1310.0020.133
ce6.geneSymbol.LENGTH0.1040.0010.106
ce6.refGene.LENGTH0.0960.0010.097
ce6.xenoRefGene.LENGTH0.1180.0020.120
ci1.geneSymbol.LENGTH0.0100.0010.011
ci1.refGene.LENGTH0.0100.0010.011
ci1.xenoRefGene.LENGTH0.2840.0030.288
ci2.ensGene.LENGTH0.0940.0010.095
ci2.geneSymbol.LENGTH0.0110.0010.012
ci2.refGene.LENGTH0.0110.0010.012
ci2.xenoRefGene.LENGTH0.5410.0050.547
danRer3.ensGene.LENGTH0.1640.0010.166
danRer3.geneSymbol.LENGTH0.0840.0010.085
danRer3.refGene.LENGTH0.0750.0010.076
danRer4.ensGene.LENGTH0.1980.0020.199
danRer4.geneSymbol.LENGTH0.0830.0010.084
danRer4.genscan.LENGTH0.0950.0010.096
danRer4.nscanGene.LENGTH0.1370.0010.139
danRer4.refGene.LENGTH0.0830.0010.084
danRer5.ensGene.LENGTH0.2070.0020.209
danRer5.geneSymbol.LENGTH0.0880.0010.089
danRer5.refGene.LENGTH0.0810.0010.082
danRer5.vegaGene.LENGTH0.0740.0020.076
danRer5.vegaPseudoGene.LENGTH0.0070.0000.008
danRer6.ensGene.LENGTH0.1970.0040.201
danRer6.geneSymbol.LENGTH0.1620.0030.165
danRer6.refGene.LENGTH0.0770.0010.078
danRer6.xenoRefGene.LENGTH0.8250.0080.922
dm1.geneSymbol.LENGTH0.0990.0010.100
dm1.genscan.LENGTH0.0400.0010.137
dm1.refGene.LENGTH0.0890.0020.090
dm2.geneSymbol.LENGTH0.0960.0010.097
dm2.geneid.LENGTH0.0580.0030.061
dm2.genscan.LENGTH0.0420.0020.044
dm2.nscanGene.LENGTH0.0740.0010.076
dm2.refGene.LENGTH0.1470.0020.147
dm3.geneSymbol.LENGTH0.1030.0010.104
dm3.nscanPasaGene.LENGTH0.0840.0010.085
dm3.refGene.LENGTH0.1010.0020.101
dp2.genscan.LENGTH0.0510.0010.052
dp2.xenoRefGene.LENGTH0.3280.0020.329
dp3.geneid.LENGTH0.0650.0030.068
dp3.genscan.LENGTH0.0430.0020.044
dp3.xenoRefGene.LENGTH0.3300.0030.332
droAna1.geneid.LENGTH0.1030.0010.104
droAna1.genscan.LENGTH0.0350.0010.037
droAna1.xenoRefGene.LENGTH0.3380.0020.340
droAna2.genscan.LENGTH0.2370.0050.242
droAna2.xenoRefGene.LENGTH0.5440.0010.545
droEre1.genscan.LENGTH0.0510.0010.052
droEre1.xenoRefGene.LENGTH0.9030.0020.906
droGri1.genscan.LENGTH0.0570.0010.058
droGri1.xenoRefGene.LENGTH0.4160.0030.419
droMoj1.geneid.LENGTH0.1720.0010.174
droMoj1.genscan.LENGTH0.0770.0010.077
droMoj1.xenoRefGene.LENGTH0.3230.0020.325
droMoj2.genscan.LENGTH0.0610.0000.061
droMoj2.xenoRefGene.LENGTH0.4310.0040.434
droPer1.genscan.LENGTH0.0630.0010.065
droPer1.xenoRefGene.LENGTH0.4880.0050.493
droSec1.genscan.LENGTH0.0460.0010.046
droSec1.xenoRefGene.LENGTH0.4140.0030.417
droSim1.geneid.LENGTH0.0620.0010.063
droSim1.genscan.LENGTH0.0430.0010.044
droSim1.xenoRefGene.LENGTH0.3440.0030.346
droVir1.geneid.LENGTH0.1450.0010.147
droVir1.genscan.LENGTH0.0630.0010.064
droVir1.xenoRefGene.LENGTH0.4310.0020.434
droVir2.genscan.LENGTH0.0580.0010.059
droVir2.xenoRefGene.LENGTH0.4150.0030.417
droYak1.geneid.LENGTH0.0660.0010.066
droYak1.genscan.LENGTH0.0450.0010.047
droYak1.xenoRefGene.LENGTH0.3500.0020.351
droYak2.genscan.LENGTH0.0440.0010.045
droYak2.xenoRefGene.LENGTH0.4090.0020.412
equCab1.geneSymbol.LENGTH0.0090.0010.011
equCab1.geneid.LENGTH0.2450.0030.249
equCab1.nscanGene.LENGTH0.0620.0030.065
equCab1.refGene.LENGTH0.0100.0020.012
equCab1.sgpGene.LENGTH0.1020.0030.105
equCab2.ensGene.LENGTH0.1310.0030.135
equCab2.geneSymbol.LENGTH0.0120.0030.015
equCab2.nscanGene.LENGTH0.0750.0040.079
equCab2.refGene.LENGTH0.0120.0020.014
equCab2.xenoRefGene.LENGTH0.8370.0050.844
felCat3.ensGene.LENGTH0.1670.0030.169
felCat3.geneSymbol.LENGTH0.0080.0000.009
felCat3.geneid.LENGTH1.5650.0171.582
felCat3.genscan.LENGTH0.1480.0020.150
felCat3.nscanGene.LENGTH0.1250.0050.129
felCat3.refGene.LENGTH0.0080.0010.008
felCat3.sgpGene.LENGTH0.1980.0030.200
felCat3.xenoRefGene.LENGTH1.8440.0131.858
fr1.ensGene.LENGTH0.6300.0050.635
fr1.genscan.LENGTH0.0790.0040.081
fr2.ensGene.LENGTH0.1880.0020.190
galGal2.ensGene.LENGTH0.0790.0010.081
galGal2.geneSymbol.LENGTH0.0240.0010.025
galGal2.geneid.LENGTH0.0570.0010.058
galGal2.genscan.LENGTH0.0740.0010.075
galGal2.refGene.LENGTH0.0230.0010.023
galGal2.sgpGene.LENGTH0.0660.0020.067
galGal3.ensGene.LENGTH0.0960.0010.098
galGal3.geneSymbol.LENGTH0.0230.0000.024
galGal3.genscan.LENGTH0.0680.0010.070
galGal3.nscanGene.LENGTH0.0960.0010.097
galGal3.refGene.LENGTH0.0220.0010.023
galGal3.xenoRefGene.LENGTH0.6820.0030.685
gasAcu1.ensGene.LENGTH0.1280.0020.129
gasAcu1.nscanGene.LENGTH0.1310.0020.133
hg16.acembly.LENGTH0.4900.0030.493
hg16.ensGene.LENGTH0.2730.0070.282
hg16.exoniphy.LENGTH0.3160.0020.319
hg16.geneSymbol.LENGTH0.1440.0010.146
hg16.geneid.LENGTH0.0780.0010.080
hg16.genscan.LENGTH0.1010.0010.102
hg16.knownGene.LENGTH0.1900.0020.192
hg16.refGene.LENGTH0.1590.0020.161
hg16.sgpGene.LENGTH0.0840.0020.087
hg17.acembly.LENGTH0.8330.0080.841
hg17.acescan.LENGTH0.0190.0010.020
hg17.ccdsGene.LENGTH0.0370.0010.038
hg17.ensGene.LENGTH0.1690.0010.170
hg17.exoniphy.LENGTH0.5710.0070.578
hg17.geneSymbol.LENGTH0.1470.0020.148
hg17.geneid.LENGTH0.2210.0020.222
hg17.genscan.LENGTH0.0910.0010.092
hg17.knownGene.LENGTH0.1600.0020.161
hg17.refGene.LENGTH0.1400.0020.142
hg17.sgpGene.LENGTH0.1100.0020.112
hg17.vegaGene.LENGTH0.0630.0010.064
hg17.vegaPseudoGene.LENGTH0.0290.0010.029
hg17.xenoRefGene.LENGTH0.7250.0050.730
hg18.acembly.LENGTH0.7340.0060.740
hg18.acescan.LENGTH0.0190.0010.019
hg18.ccdsGene.LENGTH0.0580.0010.060
hg18.ensGene.LENGTH0.3010.0030.304
hg18.exoniphy.LENGTH1.7190.0161.736
hg18.geneSymbol.LENGTH0.1390.0010.140
hg18.geneid.LENGTH0.1070.0010.108
hg18.genscan.LENGTH0.0880.0010.089
hg18.knownGene.LENGTH0.2020.0020.204
hg18.knownGeneOld3.LENGTH0.1020.0020.104
hg18.refGene.LENGTH0.1390.0020.141
hg18.sgpGene.LENGTH0.1100.0020.112
hg18.sibGene.LENGTH0.5540.0050.559
hg18.xenoRefGene.LENGTH0.5390.0070.546
hg19.ccdsGene.LENGTH0.0590.0010.061
hg19.ensGene.LENGTH0.5270.0040.532
hg19.exoniphy.LENGTH0.7910.0040.796
hg19.geneSymbol.LENGTH0.1410.0010.142
hg19.knownGene.LENGTH0.2330.0020.235
hg19.nscanGene.LENGTH0.1930.0020.195
hg19.refGene.LENGTH0.1430.0020.145
hg19.xenoRefGene.LENGTH0.5530.0040.598
loxAfr3.xenoRefGene.LENGTH1.3810.0091.389
mm7.ensGene.LENGTH0.4310.0030.434
mm7.geneSymbol.LENGTH0.1310.0030.134
mm7.geneid.LENGTH0.1180.0040.121
mm7.genscan.LENGTH0.0910.0040.095
mm7.knownGene.LENGTH0.1360.0040.140
mm7.refGene.LENGTH0.1290.0040.134
mm7.sgpGene.LENGTH0.1170.0040.122
mm7.xenoRefGene.LENGTH1.0950.0111.107
mm8.ccdsGene.LENGTH0.0330.0020.035
mm8.ensGene.LENGTH0.1100.0030.113
mm8.geneSymbol.LENGTH0.1290.0010.130
mm8.geneid.LENGTH0.1120.0010.114
mm8.genscan.LENGTH0.0850.0010.087
mm8.knownGene.LENGTH0.1390.0010.141
mm8.nscanGene.LENGTH0.0870.0010.089
mm8.refGene.LENGTH0.1210.0010.123
mm8.sgpGene.LENGTH0.1060.0010.108
mm8.sibGene.LENGTH0.3640.0040.369
mm8.xenoRefGene.LENGTH0.5380.0040.542
mm9.acembly.LENGTH0.4810.0050.485
mm9.ccdsGene.LENGTH0.0440.0010.045
mm9.ensGene.LENGTH0.4150.0030.419
mm9.exoniphy.LENGTH0.5960.0040.600
mm9.geneSymbol.LENGTH0.1330.0020.134
mm9.geneid.LENGTH0.1280.0020.129
mm9.genscan.LENGTH0.0930.0020.094
mm9.knownGene.LENGTH0.1600.0020.162
mm9.nscanGene.LENGTH0.0940.0010.095
mm9.refGene.LENGTH0.1230.0020.124
mm9.sgpGene.LENGTH0.1240.0020.126
mm9.xenoRefGene.LENGTH0.6980.0050.703
monDom1.genscan.LENGTH0.0900.0010.091
monDom4.ensGene.LENGTH0.1060.0010.106
monDom4.geneSymbol.LENGTH0.0080.0010.009
monDom4.genscan.LENGTH0.0780.0020.079
monDom4.nscanGene.LENGTH0.0810.0010.082
monDom4.refGene.LENGTH0.0080.0010.008
monDom4.xenoRefGene.LENGTH0.9120.0060.917
monDom5.ensGene.LENGTH0.1880.0020.188
monDom5.geneSymbol.LENGTH0.0080.0000.008
monDom5.genscan.LENGTH0.0820.0010.082
monDom5.nscanGene.LENGTH0.1570.0010.159
monDom5.refGene.LENGTH0.0070.0000.009
monDom5.xenoRefGene.LENGTH1.5380.0051.543
ornAna1.ensGene.LENGTH0.1500.0010.151
ornAna1.geneSymbol.LENGTH0.0060.0010.008
ornAna1.refGene.LENGTH0.0060.0010.007
ornAna1.xenoRefGene.LENGTH0.8290.0070.837
oryLat2.ensGene.LENGTH0.1090.0020.111
oryLat2.geneSymbol.LENGTH0.0080.0010.009
oryLat2.refGene.LENGTH0.0110.0010.012
oryLat2.xenoRefGene.LENGTH0.8210.0060.827
panTro1.ensGene.LENGTH0.1390.0020.139
panTro1.geneid.LENGTH0.0720.0010.074
panTro1.genscan.LENGTH0.0880.0020.091
panTro1.xenoRefGene.LENGTH0.1840.0030.187
panTro2.ensGene.LENGTH0.1660.0020.168
panTro2.geneSymbol.LENGTH0.1710.0020.173
panTro2.genscan.LENGTH0.0890.0030.092
panTro2.nscanGene.LENGTH0.0930.0020.095
panTro2.refGene.LENGTH0.1470.0030.148
panTro2.xenoRefGene.LENGTH0.9800.0110.992
petMar1.xenoRefGene.LENGTH0.4360.0040.440
ponAbe2.ensGene.LENGTH0.1260.0010.128
ponAbe2.geneSymbol.LENGTH0.020.000.02
ponAbe2.genscan.LENGTH0.0860.0010.087
ponAbe2.nscanGene.LENGTH0.0910.0010.092
ponAbe2.refGene.LENGTH0.0230.0010.024
ponAbe2.xenoRefGene.LENGTH1.0200.0071.027
priPac1.xenoRefGene.LENGTH0.5850.0040.589
rheMac2.ensGene.LENGTH0.3050.0030.308
rheMac2.geneSymbol.LENGTH0.0100.0010.011
rheMac2.geneid.LENGTH0.1050.0020.107
rheMac2.nscanGene.LENGTH0.0850.0010.086
rheMac2.refGene.LENGTH0.0090.0010.011
rheMac2.sgpGene.LENGTH0.1040.0020.105
rheMac2.xenoRefGene.LENGTH0.7280.0040.732
rn3.ensGene.LENGTH0.1550.0010.157
rn3.geneSymbol.LENGTH0.0740.0010.075
rn3.geneid.LENGTH0.1630.0020.166
rn3.genscan.LENGTH0.0890.0020.091
rn3.knownGene.LENGTH0.0360.0010.036
rn3.nscanGene.LENGTH0.0850.0010.086
rn3.refGene.LENGTH0.0810.0010.082
rn3.sgpGene.LENGTH0.0800.0010.081
rn3.xenoRefGene.LENGTH0.7440.0030.747
rn4.ensGene.LENGTH0.8480.0060.855
rn4.geneSymbol.LENGTH0.0740.0020.075
rn4.geneid.LENGTH0.1260.0020.127
rn4.genscan.LENGTH0.0870.0010.087
rn4.knownGene.LENGTH0.0350.0010.036
rn4.nscanGene.LENGTH0.0770.0010.079
rn4.refGene.LENGTH0.0680.0010.069
rn4.sgpGene.LENGTH0.1160.0020.117
rn4.xenoRefGene.LENGTH0.4950.0030.498
sacCer1.ensGene.LENGTH0.0280.0010.030
sacCer2.ensGene.LENGTH0.0280.0010.029
strPur1.geneSymbol.LENGTH0.0090.0010.010
strPur1.genscan.LENGTH0.0980.0030.102
strPur1.refGene.LENGTH0.0080.0010.009
strPur1.xenoRefGene.LENGTH0.7630.0060.770
strPur2.geneSymbol.LENGTH0.0080.0010.009
strPur2.genscan.LENGTH0.1400.0030.144
strPur2.refGene.LENGTH0.0080.0010.009
strPur2.xenoRefGene.LENGTH1.0120.0071.019
supportedGeneIDs0.0190.0010.020
supportedGenomes0.1290.0080.731
taeGut1.ensGene.LENGTH0.1230.0020.130
taeGut1.geneSymbol.LENGTH0.0100.0010.012
taeGut1.genscan.LENGTH0.0700.0020.072
taeGut1.nscanGene.LENGTH0.0560.0010.057
taeGut1.refGene.LENGTH0.1530.0050.158
taeGut1.xenoRefGene.LENGTH0.6910.0090.700
tetNig1.ensGene.LENGTH0.1230.0020.125
tetNig1.geneid.LENGTH0.1170.0020.119
tetNig1.genscan.LENGTH0.0800.0010.082
tetNig1.nscanGene.LENGTH0.1160.0010.118
tetNig2.ensGene.LENGTH0.1150.0010.117
unfactor0.0090.0020.010
xenTro1.genscan.LENGTH0.1270.0020.129
xenTro2.ensGene.LENGTH0.1350.0010.163
xenTro2.geneSymbol.LENGTH0.0480.0010.049
xenTro2.genscan.LENGTH0.1080.0020.110
xenTro2.refGene.LENGTH0.0520.0010.052