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BioC experimental data: CHECK report for MSBdata on moscato2

This page was generated on 2015-10-07 16:21:26 -0700 (Wed, 07 Oct 2015).

Package 162/241HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSBdata 0.6.0
Wolfgang Huber
Snapshot Date: 2015-10-07 07:15:35 -0700 (Wed, 07 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_1/experiment/pkgs/MSBdata
Last Changed Rev: 3279 / Revision: 3442
Last Changed Date: 2015-04-16 13:16:53 -0700 (Thu, 16 Apr 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK [ WARNINGS ] OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  WARNINGS  OK 

Summary

Package: MSBdata
Version: 0.6.0
Command: rm -rf MSBdata.buildbin-libdir MSBdata.Rcheck && mkdir MSBdata.buildbin-libdir MSBdata.Rcheck && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=MSBdata.buildbin-libdir MSBdata_0.6.0.tar.gz >MSBdata.Rcheck\00install.out 2>&1 && cp MSBdata.Rcheck\00install.out MSBdata-install.out && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD check --library=MSBdata.buildbin-libdir --install="check:MSBdata-install.out" --force-multiarch --no-vignettes --timings MSBdata_0.6.0.tar.gz
StartedAt: 2015-10-07 11:24:47 -0700 (Wed, 07 Oct 2015)
EndedAt: 2015-10-07 11:25:56 -0700 (Wed, 07 Oct 2015)
EllapsedTime: 69.3 seconds
RetCode: 0
Status:  WARNINGS  
CheckDir: MSBdata.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf MSBdata.buildbin-libdir MSBdata.Rcheck && mkdir MSBdata.buildbin-libdir MSBdata.Rcheck && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=MSBdata.buildbin-libdir MSBdata_0.6.0.tar.gz >MSBdata.Rcheck\00install.out 2>&1 && cp MSBdata.Rcheck\00install.out MSBdata-install.out  && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD check --library=MSBdata.buildbin-libdir --install="check:MSBdata-install.out" --force-multiarch --no-vignettes --timings MSBdata_0.6.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'E:/biocbld/bbs-3.1-data-experiment/meat/MSBdata.Rcheck'
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'MSBdata/DESCRIPTION' ... OK
* this is package 'MSBdata' version '0.6.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'MSBdata' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  7.0Mb
  sub-directories of 1Mb or more:
    extdata   3.5Mb
    images    3.5Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking for missing documentation entries ... WARNING
Undocumented data sets:
  'e100'
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 2 NOTEs
See
  'E:/biocbld/bbs-3.1-data-experiment/meat/MSBdata.Rcheck/00check.log'
for details.


MSBdata.Rcheck/00install.out:


install for i386

* installing *source* package 'MSBdata' ...
** data
** inst
** help
No man pages found in package  'MSBdata' 
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'MSBdata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MSBdata' as MSBdata_0.6.0.zip
* DONE (MSBdata)