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IlluminaHumanMethylation450kmanifest 0.2.0
Kasper Daniel Hansen
Snapshot Date: 2012-03-23 11:15:09 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/IlluminaHumanMethylation450kmanifest
Last Changed Rev: 1957 / Revision: 2028
Last Changed Date: 2012-03-04 07:10:50 -0800 (Sun, 04 Mar 2012)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: IlluminaHumanMethylation450kmanifest
Version: 0.2.0
Command: rm -rf IlluminaHumanMethylation450kmanifest.buildbin-libdir && mkdir IlluminaHumanMethylation450kmanifest.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=IlluminaHumanMethylation450kmanifest.buildbin-libdir IlluminaHumanMethylation450kmanifest_0.2.0.tar.gz >IlluminaHumanMethylation450kmanifest-install.out 2>&1 && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --library=IlluminaHumanMethylation450kmanifest.buildbin-libdir --install="check:IlluminaHumanMethylation450kmanifest-install.out" --force-multiarch --no-vignettes --timings IlluminaHumanMethylation450kmanifest_0.2.0.tar.gz && mv IlluminaHumanMethylation450kmanifest.buildbin-libdir/* IlluminaHumanMethylation450kmanifest.Rcheck/ && rmdir IlluminaHumanMethylation450kmanifest.buildbin-libdir
StartedAt: 2012-03-23 14:31:17 -0700 (Fri, 23 Mar 2012)
EndedAt: 2012-03-23 14:37:44 -0700 (Fri, 23 Mar 2012)
EllapsedTime: 387.4 seconds
RetCode: 0
Status:  OK  
CheckDir: IlluminaHumanMethylation450kmanifest.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.9-data-experiment/meat/IlluminaHumanMethylation450kmanifest.Rcheck'
* using R version 2.14.2 (2012-02-29)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'IlluminaHumanMethylation450kmanifest/DESCRIPTION' ... OK
* this is package 'IlluminaHumanMethylation450kmanifest' version '0.2.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'IlluminaHumanMethylation450kmanifest' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 13.9Mb
  sub-directories of 1Mb or more:
    data  13.9Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... NOTE
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                                           old_size new_size compress
  IlluminaHumanMethylation450kmanifest.rda   13.9Mb    8.6Mb       xz
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK

IlluminaHumanMethylation450kmanifest.Rcheck/00install.out:


install for i386

* installing *source* package 'IlluminaHumanMethylation450kmanifest' ...
** data
**  moving datasets to lazyload DB
** inst
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'IlluminaHumanMethylation450kmanifest' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'IlluminaHumanMethylation450kmanifest' as IlluminaHumanMethylation450kmanifest_0.2.0.zip

* DONE (IlluminaHumanMethylation450kmanifest)