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Package 172/514HostnameOS / ArchBUILDCHECKBUILD BIN
flowPlots 1.2.0
N. Hawkins
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/flowPlots
Last Changed Rev: 59920 / Revision: 64395
Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK [ OK ]
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: flowPlots
Version: 1.2.0
Command: /home/biocbuild/bbs-2.9-bioc/R/bin/R CMD check --no-vignettes --timings flowPlots_1.2.0.tar.gz
StartedAt: 2012-03-24 00:20:16 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 00:20:55 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 39.3 seconds
RetCode: 0
Status:  OK 
CheckDir: flowPlots.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.9-bioc/meat/flowPlots.Rcheck’
* using R version 2.14.2 (2012-02-29)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘flowPlots/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘flowPlots’ version ‘1.2.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘flowPlots’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

flowPlots.Rcheck/00install.out:

* installing *source* package ‘flowPlots’ ...
** R
** data
**  moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘flowPlots.Rnw’ 
** testing if installed package can be loaded

* DONE (flowPlots)

flowPlots.Rcheck/flowPlots-Ex.timings:

nameusersystemelapsed
GroupListBoxplot0.2360.0000.236
StackedData-class9.4040.0289.656
adultsNeonates0.0040.0000.002
computeMarginalData-methods2.0960.0002.098
computeMarkers-methods0.0000.0040.001
computePFDData-methods1.8440.0081.867
computePFDGroupStatsList0.3760.0080.397
computePFDPartsData-methods2.5970.0082.698
computeProfileData-methods2.4440.0042.507
legendPFDStatsGroupNames0.1200.0160.139
makeBarplotData0.0080.0040.012
makeDataList0.0560.0000.057
makeTernaryData0.1200.0120.133
marginalDF0.0000.0000.002
marginalData-methods0.0040.0000.002
markerMatrix0.0000.0000.001
markers-methods0.0040.0000.001
pfdDF0.0000.0000.001
pfdData-methods0.0040.0000.002
pfdPartsData-methods0.0000.0000.002
pfdPartsList0.0000.0000.001
profileDF0.0040.0000.001
profileData-methods0.0000.0000.002
readStackedData-methods0.0440.0040.048
stackedData-methods0.0640.0040.065