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Package 162/514HostnameOS / ArchBUILDCHECKBUILD BIN
fastseg 1.0.4
Guenter Klambauer
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/fastseg
Last Changed Rev: 63758 / Revision: 64395
Last Changed Date: 2012-03-12 02:23:42 -0700 (Mon, 12 Mar 2012)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: fastseg
Version: 1.0.4
Command: rm -rf fastseg.buildbin-libdir && mkdir fastseg.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=fastseg.buildbin-libdir fastseg_1.0.4.tar.gz
StartedAt: 2012-03-24 03:41:34 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 03:42:19 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 45.0 seconds
RetCode: 0
Status:  OK  
PackageFile: fastseg_1.0.4.zip
PackageFileSize: 851.5 KiB

Command output


install for i386

* installing *source* package 'fastseg' ...
** libs
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c R_init_fastseg.c -o R_init_fastseg.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -mtune=core2 -c segment.cpp -o segment.o
segment.cpp: In function 'SEXPREC* segment(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
segment.cpp:61:20: warning: variable 'globalSd' set but not used [-Wunused-but-set-variable]
segment.cpp:62:9: warning: variable 'oldStatistic' set but not used [-Wunused-but-set-variable]
segment.cpp:63:31: warning: variable 'maxStatistic' set but not used [-Wunused-but-set-variable]
segment.cpp:64:40: warning: variable 'maxIdx' set but not used [-Wunused-but-set-variable]
segment.cpp:66:9: warning: unused variable 'Rf_beta' [-Wunused-variable]
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -mtune=core2 -c segmentCyberT.cpp -o segmentCyberT.o
segmentCyberT.cpp: In function 'SEXPREC* segmentCyberT(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
segmentCyberT.cpp:59:20: warning: variable 'globalSd' set but not used [-Wunused-but-set-variable]
segmentCyberT.cpp:60:9: warning: variable 'oldStatistic' set but not used [-Wunused-but-set-variable]
segmentCyberT.cpp:61:31: warning: variable 'maxStatistic' set but not used [-Wunused-but-set-variable]
segmentCyberT.cpp:63:50: warning: unused variable 'Rf_beta' [-Wunused-variable]
g++ -shared -s -static-libgcc -o fastseg.dll tmp.def R_init_fastseg.o segment.o segmentCyberT.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/fastseg.buildbin-libdir/fastseg/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'fastseg.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'fastseg' ...
** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c R_init_fastseg.c -o R_init_fastseg.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c segment.cpp -o segment.o
segment.cpp: In function 'SEXPREC* segment(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
segment.cpp:61:20: warning: variable 'globalSd' set but not used [-Wunused-but-set-variable]
segment.cpp:62:9: warning: variable 'oldStatistic' set but not used [-Wunused-but-set-variable]
segment.cpp:63:31: warning: variable 'maxStatistic' set but not used [-Wunused-but-set-variable]
segment.cpp:64:40: warning: variable 'maxIdx' set but not used [-Wunused-but-set-variable]
segment.cpp:66:9: warning: unused variable 'Rf_beta' [-Wunused-variable]
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c segmentCyberT.cpp -o segmentCyberT.o
segmentCyberT.cpp: In function 'SEXPREC* segmentCyberT(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
segmentCyberT.cpp:59:20: warning: variable 'globalSd' set but not used [-Wunused-but-set-variable]
segmentCyberT.cpp:60:9: warning: variable 'oldStatistic' set but not used [-Wunused-but-set-variable]
segmentCyberT.cpp:61:31: warning: variable 'maxStatistic' set but not used [-Wunused-but-set-variable]
segmentCyberT.cpp:63:50: warning: unused variable 'Rf_beta' [-Wunused-variable]
g++ -m64 -shared -s -static-libgcc -o fastseg.dll tmp.def R_init_fastseg.o segment.o segmentCyberT.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/fastseg.buildbin-libdir/fastseg/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'fastseg' as fastseg_1.0.4.zip

* DONE (fastseg)