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Package 288/514HostnameOS / ArchBUILDCHECKBUILD BIN
LVSmiRNA 1.4.0
Stefano Calza
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/LVSmiRNA
Last Changed Rev: 59920 / Revision: 64395
Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: LVSmiRNA
Version: 1.4.0
Command: rm -rf LVSmiRNA.buildbin-libdir && mkdir LVSmiRNA.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=LVSmiRNA.buildbin-libdir LVSmiRNA_1.4.0.tar.gz
StartedAt: 2012-03-24 03:53:04 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 03:53:43 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 38.6 seconds
RetCode: 0
Status:  OK  
PackageFile: LVSmiRNA_1.4.0.zip
PackageFileSize: 719 KiB

Command output


install for i386

* installing *source* package 'LVSmiRNA' ...
** libs
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB         -O3 -Wall  -std=gnu99 -mtune=core2 -c basic_fns.c -o basic_fns.o
basic_fns.c: In function 'lvs_median':
basic_fns.c:146:7: warning: unused variable 'i' [-Wunused-variable]
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB         -O3 -Wall  -std=gnu99 -mtune=core2 -c init.c -o init.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB         -O3 -Wall  -std=gnu99 -mtune=core2 -c lvs_rlm.c -o lvs_rlm.o
lvs_rlm.c: In function 'gamma_fit':
lvs_rlm.c:175:30: warning: variable 'converged' set but not used [-Wunused-but-set-variable]
lvs_rlm.c: In function 'test_gamma_fit':
lvs_rlm.c:286:30: warning: variable 'converged' set but not used [-Wunused-but-set-variable]
gcc -shared -s -static-libgcc -o LVSmiRNA.dll tmp.def basic_fns.o init.o lvs_rlm.o -lRzlib -lgfortran -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lRlapack -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lRblas -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/LVSmiRNA.buildbin-libdir/LVSmiRNA/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'plot' from package 'graphics' in package 'LVSmiRNA'
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'LVSmiRNA.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'LVSmiRNA' ...
** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c basic_fns.c -o basic_fns.o
basic_fns.c: In function 'lvs_median':
basic_fns.c:146:7: warning: unused variable 'i' [-Wunused-variable]
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c init.c -o init.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c lvs_rlm.c -o lvs_rlm.o
lvs_rlm.c: In function 'gamma_fit':
lvs_rlm.c:175:30: warning: variable 'converged' set but not used [-Wunused-but-set-variable]
lvs_rlm.c: In function 'test_gamma_fit':
lvs_rlm.c:286:30: warning: variable 'converged' set but not used [-Wunused-but-set-variable]
gcc -m64 -shared -s -static-libgcc -o LVSmiRNA.dll tmp.def basic_fns.o init.o lvs_rlm.o -lRzlib -lgfortran -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lRlapack -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lRblas -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/LVSmiRNA.buildbin-libdir/LVSmiRNA/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'LVSmiRNA' as LVSmiRNA_1.4.0.zip

* DONE (LVSmiRNA)