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Package 240/514HostnameOS / ArchBUILDCHECKBUILD BIN
Heatplus 2.1.0
Alexander Ploner
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/Heatplus
Last Changed Rev: 61326 / Revision: 64395
Last Changed Date: 2011-12-13 17:01:00 -0800 (Tue, 13 Dec 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: Heatplus
Version: 2.1.0
Command: /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch Heatplus_2.1.0.tar.gz
StartedAt: 2012-03-24 01:49:56 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 01:50:42 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 45.9 seconds
RetCode: 0
Status:  OK 
CheckDir: Heatplus.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.9-bioc/meat/Heatplus.Rcheck'
* using R version 2.14.2 (2012-02-29)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'Heatplus/DESCRIPTION' ... OK
* this is package 'Heatplus' version '2.1.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'Heatplus' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
annHeatmap2: no visible global function definition for 'clustfun'
annHeatmap2: no visible global function definition for 'distfun'
annHeatmap2: no visible binding for global variable 'cuth'
annHeatmap2: no visible binding for global variable 'asIs'
annHeatmap2: no visible binding for global variable 'inclRef'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

Heatplus.Rcheck/00install.out:

* installing *source* package 'Heatplus' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'annHeatmap.Rnw' 
   'annHeatmapCommentedSource.Rnw' 
   'oldHeatplus.Rnw' 
** testing if installed package can be loaded

* DONE (Heatplus)

Heatplus.Rcheck/Heatplus-Ex.timings:

nameusersystemelapsed
RGBColVec0.0430.0060.048
annHeatmap3.0420.0883.159
annHeatmap20.3520.0130.371
breakColors0.0090.0020.011
convAnnData0.1010.0060.108
doLegend0.0020.0010.003
g2r.colors0.0070.0010.008
heatmapLayout0.0030.0010.004
heatmap_22.8970.0612.994
heatmap_plus1.2550.0421.309
modifyExistingList0.0010.0010.003
niceBreaks0.0010.0000.001
oldCutplot.dendrogram0.0840.0030.087
oldPicketplot0.0220.0020.025
picketPlot0.1900.0060.196
plot.annHeatmap0.3550.0120.384
print.annHeatmap0.0360.0000.037
regHeatmap0.0550.0010.057