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Package 133/514HostnameOS / ArchBUILDCHECKBUILD BIN
DESeq 1.6.1
Simon Anders
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/DESeq
Last Changed Rev: 60544 / Revision: 64395
Last Changed Date: 2011-11-20 01:34:36 -0800 (Sun, 20 Nov 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: DESeq
Version: 1.6.1
Command: rm -rf DESeq.buildbin-libdir && mkdir DESeq.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=DESeq.buildbin-libdir DESeq_1.6.1.tar.gz
StartedAt: 2012-03-24 03:39:11 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 03:39:49 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 38.0 seconds
RetCode: 0
Status:  OK  
PackageFile: DESeq_1.6.1.zip
PackageFileSize: 2.168 MiB

Command output


install for i386

* installing *source* package 'DESeq' ...
** libs
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c pval.c -o pval.o
pval.c: In function 'add_from_both_sides':
pval.c:26:11: warning: unused variable 'esttotalperlength' [-Wunused-variable]
gcc -shared -s -static-libgcc -o DESeq.dll tmp.def pval.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/DESeq.buildbin-libdir/DESeq/libs/i386
** R
** inst
** preparing package for lazy loading
locfit 1.5-6 	 2010-01-20 
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'DESeq.Rnw' 
** testing if installed package can be loaded
locfit 1.5-6 	 2010-01-20 

add DLL for x64

* installing *source* package 'DESeq' ...
** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c pval.c -o pval.o
pval.c: In function 'add_from_both_sides':
pval.c:26:11: warning: unused variable 'esttotalperlength' [-Wunused-variable]
gcc -m64 -shared -s -static-libgcc -o DESeq.dll tmp.def pval.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/DESeq.buildbin-libdir/DESeq/libs/x64
** testing if installed package can be loaded
locfit 1.5-6 	 2010-01-20 
* MD5 sums
packaged installation of 'DESeq' as DESeq_1.6.1.zip

* DONE (DESeq)