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Package 55/479HostnameOS / ArchBUILDCHECKBUILD BIN
bgx 1.17.0
Ernest Turro
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bgx
Last Changed Rev: 54802 / Revision: 56603
Last Changed Date: 2011-04-13 15:36:43 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: bgx
Version: 1.17.0
Command: mkdir bgx.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=bgx.buildbin-libdir bgx_1.17.0.tar.gz
StartedAt: 2011-07-07 06:47:44 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 06:52:24 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 279.7 seconds
RetCode: 0
Status:  OK  
PackageFile: bgx_1.17.0.zip
PackageFileSize: 674 KiB

Command output


install for i386

* installing *source* package 'bgx' ...
** libs
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c bgx.cc -o bgx.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c bgx_frontend.cc -o bgx_frontend.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3  -std=c99   -O3 -Wall  -std=gnu99 -mtune=core2 -c qnorm.c -o qnorm.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c rundir.cc -o rundir.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c sokal.cc -o sokal.o
g++ -shared -s -static-libgcc -o bgx.dll tmp.def bgx.o bgx_frontend.o qnorm.o rundir.o sokal.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/bgx.buildbin-libdir/bgx/libs/i386
** R
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'bgx.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'bgx' ...
** libs
x86_64-w64-mingw32-g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c bgx.cc -o bgx.o
x86_64-w64-mingw32-g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c bgx_frontend.cc -o bgx_frontend.o
x86_64-w64-mingw32-gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3  -std=c99   -O2 -Wall  -std=gnu99 -mtune=core2 -c qnorm.c -o qnorm.o
x86_64-w64-mingw32-g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c rundir.cc -o rundir.o
x86_64-w64-mingw32-g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c sokal.cc -o sokal.o
x86_64-w64-mingw32-g++ -shared -s -static-libgcc -o bgx.dll tmp.def bgx.o bgx_frontend.o qnorm.o rundir.o sokal.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/bgx.buildbin-libdir/bgx/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bgx' as bgx_1.17.0.zip

* DONE (bgx)