Back to the "Multiple platform build/check report" A  B  C  D  E  F [G] H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 192/479HostnameOS / ArchBUILDCHECKBUILD BIN
GenomeGraphs 1.13.0
Steffen Durinck
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GenomeGraphs
Last Changed Rev: 54802 / Revision: 56603
Last Changed Date: 2011-04-13 15:36:43 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK [ OK ] OK 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: GenomeGraphs
Version: 1.13.0
Command: D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --no-vignettes --timings --no-multiarch GenomeGraphs_1.13.0.tar.gz
StartedAt: 2011-07-07 04:13:12 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 04:15:33 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 141.1 seconds
RetCode: 0
Status:  OK  
CheckDir: GenomeGraphs.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.9-bioc/meat/GenomeGraphs.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-06-03 r56036)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'GenomeGraphs/DESCRIPTION' ... OK
* this is package 'GenomeGraphs' version '1.13.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GenomeGraphs' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

GenomeGraphs.Rcheck/00install.out:

* installing *source* package 'GenomeGraphs' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'GenomeGraphs.Rnw' 
** testing if installed package can be loaded

* DONE (GenomeGraphs)

GenomeGraphs.Rcheck/GenomeGraphs-Ex.timings:

nameusersystemelapsed
AnnotationTrack-class000
BaseTrack-class000
DisplayPars-class0.020.000.01
DisplayPars0.560.037.57
ExonArray-class000
Gene-class000
GeneModel-class0.160.000.15
GeneRegion-class000
GenericArray-class000
GenomeAxis-class000
HighlightRegion-class000
Ideogram-class000
ImplementsTrackOverlay-class0.010.000.02
Legend-class000
MappedRead-class000
Overlay-class000
RectangleOverlay-class000
Segmentation-class000
Smoothing-class000
TextOverlay-class000
Title-class000
TrackOverlay-class000
Transcript-class000
TranscriptRegion-class000
cn000
exonProbePos000
gdObject-class000
gdPlot 2.01 0.0089.50
getPar000
getSize000
ideogramTab000
intensity000
makeAnnotationTrack0.030.000.03
makeBaseTrack000
makeExonArray000
makeGene000
makeGeneModel000
makeGeneRegion000
makeGenericArray000
makeGenomeAxis000
makeIdeogram000
makeLegend0.010.000.02
makeRectangleOverlay0.160.000.15
makeSegmentation0.140.010.16
makeSmoothing0.170.000.17
makeTextOverlay0.160.000.16
makeTitle000
makeTranscript000
probestart000
segEnd000
segStart000
segments000
seqDataEx0.030.000.03
setPar0.020.000.01
showDisplayOptions000
unrData000
unrNProbes000
unrPositions000
yeastCons1000