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Package 222/479HostnameOS / ArchBUILDCHECKBUILD BIN
GSVA 1.1.2
Justin Guinney
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GSVA
Last Changed Rev: 56153 / Revision: 56603
Last Changed Date: 2011-06-13 15:40:41 -0700 (Mon, 13 Jun 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK [ OK ]
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  ERROR 

Summary

Package: GSVA
Version: 1.1.2
Command: mkdir GSVA.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --no-multiarch --library=GSVA.buildbin-libdir GSVA_1.1.2.tar.gz
StartedAt: 2011-07-07 07:03:28 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 07:03:37 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 8.9 seconds
RetCode: 0
Status:  OK  
PackageFile: GSVA_1.1.2.zip
PackageFileSize: 1.547 MiB

Command output

* installing *source* package 'GSVA' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/include"       -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -c assess_density_test.c -o assess_density_test.o
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/include"       -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -c ks_test.c -o ks_test.o
ks_test.c: In function 'ks_sample':
ks_test.c:22:9: warning: unused variable 'mx_value'
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/include"       -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -c register_cmethods.c -o register_cmethods.o
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o GSVA.dll tmp.def assess_density_test.o ks_test.o register_cmethods.o -LC:/GSL/x64/lib -lgsl -lgslcblas -lm -LD:/biocbld/bbs-2.9-bioc/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/GSVA.buildbin-libdir/GSVA/libs/x64
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'GSVA.Rnw' 
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GSVA' as GSVA_1.1.2.zip

* DONE (GSVA)