GOSemSim 1.11.4
Guangchuang Yu
| Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GOSemSim | | Last Changed Rev: 56374 / Revision: 56603 | | Last Changed Date: 2011-06-23 04:45:22 -0700 (Thu, 23 Jun 2011) |
| wilson2 | Linux (openSUSE 11.4) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | OK | OK | OK |
| moscato1 | Windows Server 2008 R2 Enterprise (64-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | [ OK ] | OK |
* using log directory '/Users/biocbuild/bbs-2.9-bioc/meat/GOSemSim.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-06-22 r56208)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'GOSemSim/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'GOSemSim' version '1.11.4'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GOSemSim' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... NOTE
Note: significantly better compression could be obtained
by using tools::resaveRdaFiles() or R CMD build --resave-data
old_size new_size compress
Info_Contents_anopheles_BP.rda 70Kb 20Kb xz
Info_Contents_anopheles_CC.rda 11Kb 9Kb bzip2
Info_Contents_anopheles_MF.rda 30Kb 9Kb xz
Info_Contents_arabidopsis_BP.rda 68Kb 19Kb xz
Info_Contents_arabidopsis_CC.rda 11Kb 9Kb bzip2
Info_Contents_arabidopsis_MF.rda 31Kb 10Kb xz
Info_Contents_bovine_BP.rda 71Kb 21Kb xz
Info_Contents_bovine_CC.rda 11Kb 9Kb bzip2
Info_Contents_bovine_MF.rda 31Kb 10Kb xz
Info_Contents_canine_BP.rda 77Kb 25Kb xz
Info_Contents_canine_CC.rda 12Kb 5Kb xz
Info_Contents_canine_MF.rda 32Kb 11Kb xz
Info_Contents_chicken_BP.rda 70Kb 20Kb xz
Info_Contents_chicken_CC.rda 11Kb 9Kb bzip2
Info_Contents_chicken_MF.rda 30Kb 9Kb xz
Info_Contents_chimp_BP.rda 77Kb 25Kb xz
Info_Contents_chimp_CC.rda 12Kb 5Kb xz
Info_Contents_chimp_MF.rda 32Kb 11Kb xz
Info_Contents_coelicolor_BP.rda 59Kb 13Kb xz
Info_Contents_coelicolor_MF.rda 28Kb 8Kb xz
Info_Contents_ecolik12_BP.rda 57Kb 11Kb xz
Info_Contents_ecolik12_MF.rda 25Kb 6Kb xz
Info_Contents_ecsakai_BP.rda 54Kb 9Kb xz
Info_Contents_ecsakai_MF.rda 24Kb 5Kb xz
Info_Contents_fly_BP.rda 68Kb 19Kb xz
Info_Contents_fly_CC.rda 11Kb 9Kb bzip2
Info_Contents_fly_MF.rda 31Kb 10Kb xz
Info_Contents_human_BP.rda 77Kb 25Kb xz
Info_Contents_human_CC.rda 12Kb 6Kb xz
Info_Contents_human_MF.rda 33Kb 11Kb xz
Info_Contents_malaria_BP.rda 60Kb 13Kb xz
Info_Contents_malaria_MF.rda 28Kb 8Kb xz
Info_Contents_mouse_BP.rda 77Kb 25Kb xz
Info_Contents_mouse_CC.rda 12Kb 5Kb xz
Info_Contents_mouse_MF.rda 33Kb 11Kb xz
Info_Contents_pig_BP.rda 74Kb 22Kb xz
Info_Contents_pig_CC.rda 11Kb 5Kb xz
Info_Contents_pig_MF.rda 31Kb 10Kb xz
Info_Contents_rat_BP.rda 78Kb 26Kb xz
Info_Contents_rat_CC.rda 12Kb 6Kb xz
Info_Contents_rat_MF.rda 33Kb 11Kb xz
Info_Contents_rhesus_BP.rda 76Kb 25Kb xz
Info_Contents_rhesus_CC.rda 12Kb 5Kb xz
Info_Contents_rhesus_MF.rda 32Kb 11Kb xz
Info_Contents_worm_BP.rda 64Kb 16Kb xz
Info_Contents_worm_CC.rda 10Kb 8Kb bzip2
Info_Contents_worm_MF.rda 29Kb 9Kb xz
Info_Contents_xenopus_BP.rda 75Kb 24Kb xz
Info_Contents_xenopus_CC.rda 12Kb 5Kb xz
Info_Contents_xenopus_MF.rda 32Kb 10Kb xz
Info_Contents_yeast_BP.rda 66Kb 17Kb xz
Info_Contents_yeast_CC.rda 11Kb 5Kb xz
Info_Contents_yeast_MF.rda 30Kb 9Kb xz
Info_Contents_zebrafish_BP.rda 65Kb 17Kb xz
Info_Contents_zebrafish_CC.rda 10Kb 8Kb bzip2
Info_Contents_zebrafish_MF.rda 30Kb 9Kb xz
* checking sizes of PDF files under 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK
* installing *source* package 'GOSemSim' ...
** R
** data
** inst
** preparing package for lazy loading
Loading Tcl/Tk interface ... done
Loading required package: DBI
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
'GOSemSim.Rnw'
** testing if installed package can be loaded
* DONE (GOSemSim)