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Package 171/462HostnameOS / ArchBUILDCHECKBUILD BIN
genefilter 1.35.0
Biocore Team c/o BioC user list
Snapshot Date: 2011-05-09 07:20:56 -0700 (Mon, 09 May 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genefilter
Last Changed Rev: 54802 / Revision: 55359
Last Changed Date: 2011-04-13 15:36:43 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: genefilter
Version: 1.35.0
Command: E:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --library=genefilter.buildbin-libdir genefilter_1.35.0.tar.gz
StartedAt: 2011-05-09 16:17:06 -0700 (Mon, 09 May 2011)
EndedAt: 2011-05-09 16:17:21 -0700 (Mon, 09 May 2011)
EllapsedTime: 14.7 seconds
RetCode: 0
Status:  OK  
PackageFile: genefilter_1.35.0.zip
PackageFileSize: 803 KiB

Command output

* installing *source* package 'genefilter' ...
** libs
g++  -I"E:/biocbld/bbs-2.9-bioc/R/include"          -O2 -Wall  -c half_range_mode.cpp -o half_range_mode.o
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include"          -O3 -Wall  -std=gnu99 -c init.c -o init.o
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include"          -O3 -Wall  -std=gnu99 -c nd.c -o nd.o
nd.c: In function 'gf_dist_binary':
nd.c:242:16: warning: unused variable 'w2'
nd.c:242:12: warning: unused variable 'w1'
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include"          -O3 -Wall  -std=gnu99 -c pAUC.c -o pAUC.o
pAUC.c: In function 'pAUC_c':
pAUC.c:73:9: warning: operation on 'ta' may be undefined
pAUC.c:76:6: warning: operation on 'ta' may be undefined
pAUC.c:79:9: warning: operation on 'ta' may be undefined
pAUC.c: In function 'pAUC':
pAUC.c:141:5: warning: suggest parentheses around comparison in operand of '|'
pAUC.c:123:9: warning: unused variable 'i'
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include"          -O3 -Wall  -std=gnu99 -c rowPAUCs.c -o rowPAUCs.o
rowPAUCs.c: In function 'ROCpAUC_c':
rowPAUCs.c:97:9: warning: operation on 'ta' may be undefined
rowPAUCs.c:100:6: warning: operation on 'ta' may be undefined
rowPAUCs.c:103:9: warning: operation on 'ta' may be undefined
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include"          -O3 -Wall  -std=gnu99 -c rowttests.c -o rowttests.o
gfortran      -O3  -c ttest.f -o ttest.o
g++ -shared -s -static-libgcc -o genefilter.dll tmp.def half_range_mode.o init.o nd.o pAUC.o rowPAUCs.o rowttests.o ttest.o -lgfortran -LE:/biocbld/bbs-2.9-bioc/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.9-bioc/meat/genefilter.buildbin-libdir/genefilter/libs/i386
** R
** data
**  moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Creating a new generic function for "plot" in "genefilter"
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'howtogenefilter.Rnw' 
   'howtogenefinder.Rnw' 
   'independent_filtering_plots.Rnw' 
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'genefilter' as genefilter_1.35.0.zip

* DONE (genefilter)