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Package 13/462HostnameOS / ArchBUILDCHECKBUILD BIN
affy 1.31.1
Rafael A. Irizarry
Snapshot Date: 2011-05-09 07:20:56 -0700 (Mon, 09 May 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/affy
Last Changed Rev: 55189 / Revision: 55359
Last Changed Date: 2011-04-30 16:17:17 -0700 (Sat, 30 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: affy
Version: 1.31.1
Command: E:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --library=affy.buildbin-libdir affy_1.31.1.tar.gz
StartedAt: 2011-05-09 16:06:35 -0700 (Mon, 09 May 2011)
EndedAt: 2011-05-09 16:06:50 -0700 (Mon, 09 May 2011)
EllapsedTime: 15.2 seconds
RetCode: 0
Status:  OK  
PackageFile: affy_1.31.1.zip
PackageFileSize: 1.571 MiB

Command output

* installing *source* package 'affy' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"E:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c chipbackground.c -o chipbackground.o
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"E:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c getall_locations.c -o getall_locations.o
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"E:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c mas5calls.c -o mas5calls.o
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"E:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c rma2.c -o rma2.o
gcc  -I"E:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"E:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c rma_common.c -o rma_common.o
gcc -shared -s -static-libgcc -o affy.dll tmp.def chipbackground.o getall_locations.o mas5calls.o rma2.o rma_common.o -lRzlib -LE:/biocbld/bbs-2.9-bioc/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.9-bioc/meat/affy.buildbin-libdir/affy/libs/i386
** R
** data
** demo
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Creating a new generic function for "open" in "affy"
Creating a new generic function for "close" in "affy"
Creating a new generic function for "colnames" in "affy"
Creating a new generic function for "barplot" in "affy"
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'affy.Rnw' 
   'builtinMethods.Rnw' 
   'customMethods.Rnw' 
   'vim.Rnw' 
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'affy' as affy_1.31.1.zip

* DONE (affy)