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Package 26/106HostnameOS / ArchBUILDCHECKBUILD BIN
dressCheck 0.1.2
Vincent Carey
Snapshot Date: 2011-10-18 23:15:16 -0700 (Tue, 18 Oct 2011)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/dressCheck
Last Changed Rev: 1707 / Revision: 1763
Last Changed Date: 2011-07-26 01:26:31 -0700 (Tue, 26 Jul 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ WARNINGS ] OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: dressCheck
Version: 0.1.2
Command: D:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD check --no-vignettes --timings --no-multiarch dressCheck_0.1.2.tar.gz
StartedAt: 2011-10-19 02:37:27 -0700 (Wed, 19 Oct 2011)
EndedAt: 2011-10-19 02:38:20 -0700 (Wed, 19 Oct 2011)
EllapsedTime: 52.6 seconds
RetCode: 0
Status:  WARNINGS  
CheckDir: dressCheck.Rcheck
Warnings: 1

Command output

* using log directory 'D:/biocbld/bbs-2.8-data-experiment/meat/dressCheck.Rcheck'
* using R version 2.13.2 (2011-09-30)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'dressCheck/DESCRIPTION' ... OK
* this is package 'dressCheck' version '0.1.2'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'dressCheck' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 65.8Mb
  sub-directories of 1Mb or more:
    data         54.4Mb
    sampleRemap  11.2Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: DrAsGiven.Rd:69-71: Dropping empty section \details
prepare_Rd: DrAsGiven.Rd:72-74: Dropping empty section \source
prepare_Rd: DrAsGiven.Rd:75-77: Dropping empty section \references
prepare_Rd: E2F3sig.probes.Rd:16-18: Dropping empty section \details
prepare_Rd: E2F3sig.probes.Rd:19-21: Dropping empty section \source
prepare_Rd: E2F3sig.probes.Rd:22-24: Dropping empty section \references
prepare_Rd: Src.probes.Rd:17-19: Dropping empty section \details
prepare_Rd: Src.probes.Rd:20-22: Dropping empty section \source
prepare_Rd: Src.probes.Rd:23-25: Dropping empty section \references
prepare_Rd: c119.Rd:97-99: Dropping empty section \source
prepare_Rd: c119.Rd:100-102: Dropping empty section \references
prepare_Rd: corrp116.Rd:71-73: Dropping empty section \details
prepare_Rd: corrp116.Rd:74-76: Dropping empty section \source
prepare_Rd: corrp116.Rd:77-79: Dropping empty section \references
prepare_Rd: e2f3Wts.Rd:19-21: Dropping empty section \details
prepare_Rd: e2f3Wts.Rd:22-24: Dropping empty section \source
prepare_Rd: e2f3Wts.Rd:25-27: Dropping empty section \references
prepare_Rd: platsigprobes.Rd:17-19: Dropping empty section \details
prepare_Rd: platsigprobes.Rd:20-22: Dropping empty section \source
prepare_Rd: platsigprobes.Rd:23-25: Dropping empty section \references
prepare_Rd: pwLines.Rd:127-129: Dropping empty section \details
prepare_Rd: pwLines.Rd:130-132: Dropping empty section \source
prepare_Rd: pwLines.Rd:133-135: Dropping empty section \references
prepare_Rd: srcWts.Rd:19-21: Dropping empty section \details
prepare_Rd: srcWts.Rd:22-24: Dropping empty section \source
prepare_Rd: srcWts.Rd:25-27: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... NOTE
'library' or 'require' calls not declared from:
  chron survival
* checking package vignettes in 'inst/doc' ... WARNING
Package vignette(s) without corresponding PDF:
   short.Rnw

* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning, see
  'D:/biocbld/bbs-2.8-data-experiment/meat/dressCheck.Rcheck/00check.log'
for details

dressCheck.Rcheck/00install.out:

* installing *source* package 'dressCheck' ...
** data
** inst
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (dressCheck)

dressCheck.Rcheck/dressCheck-Ex.timings:

nameusersystemelapsed
DrAsGiven1.890.001.89
E2F3sig.probes000
Src.probes000
c1193.130.033.15
corrp1161.750.031.78
e2f3Wts0.010.000.02
platsigprobes000
pwLines3.630.083.72
srcWts000