Package: CLL

Version: 1.2.8

Command: /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch CLL_1.2.8.tar.gz

StartedAt: 2011-10-19 01:12:22 -0700 (Wed, 19 Oct 2011)

EndedAt: 2011-10-19 01:13:22 -0700 (Wed, 19 Oct 2011)

EllapsedTime: 59.3 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: CLL.Rcheck

Warnings: 1

* using log directory '/Users/biocbuild/bbs-2.8-data-experiment/meat/CLL.Rcheck'
* using R version 2.13.2 (2011-09-30)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'CLL/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'CLL' version '1.2.8'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'CLL' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 16.0Mb
  sub-directories of 1Mb or more:
    data  15.9Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  Warning: package needs dependence on R (>= 2.10)
* checking examples ... OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning, see
  '/Users/biocbuild/bbs-2.8-data-experiment/meat/CLL.Rcheck/00check.log'
for details

* installing *source* package 'CLL' ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (CLL)

name	user	system	elapsed
CLL-package	0.201	0.015	0.231
CLLbatch	7.025	0.382	7.627
disease	0.021	0.001	0.024
nsFilter	0.366	0.028	0.474
sCLLex	0.173	0.010	0.184
sFiltert	0.213	0.010	0.258
sFiltertBH	0.210	0.010	0.278