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Package 256/467HostnameOS / ArchBUILDCHECKBUILD BIN
lol 1.0.1
Yinyin Yuan
Snapshot Date: 2011-10-20 07:20:33 -0700 (Thu, 20 Oct 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_8/madman/Rpacks/lol
Last Changed Rev: 54878 / Revision: 59457
Last Changed Date: 2011-04-15 07:46:33 -0700 (Fri, 15 Apr 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: lol
Version: 1.0.1
Command: /home/biocbuild/bbs-2.8-bioc/R/bin/R CMD check --no-vignettes --timings lol_1.0.1.tar.gz
StartedAt: 2011-10-20 13:18:41 -0700 (Thu, 20 Oct 2011)
EndedAt: 2011-10-20 13:21:30 -0700 (Thu, 20 Oct 2011)
EllapsedTime: 168.8 seconds
RetCode: 0
Status:  OK 
CheckDir: lol.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.8-bioc/meat/lol.Rcheck’
* using R version 2.13.2 (2011-09-30)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘lol/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘lol’ version ‘1.0.1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘lol’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

lol.Rcheck/00install.out:

* installing *source* package ‘lol’ ...
** R
** data
** inst
** preparing package for lazy loading
Welcome to penalized. For extended examples, see vignette("penalized").
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Welcome to penalized. For extended examples, see vignette("penalized").

* DONE (lol)

lol.Rcheck/lol-Ex.timings:

nameusersystemelapsed
chin070.2560.0080.264
getLambdaNcoef1.3360.0041.339
lasso3.2840.0003.301
lasso.cv2.9840.0042.994
lasso.multiSplit5.6850.0125.797
lasso.simultaneous7.6240.0008.005
lasso.stability3.9280.0004.035
lmMatrixFit23.978 0.01224.198
lol-package23.753 0.02824.004
matrixLasso23.058 0.00823.138
plotGW0.1960.0000.208