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Package 185/467HostnameOS / ArchBUILDCHECKBUILD BIN
genoCN 1.4.0
Wei Sun
Snapshot Date: 2011-10-20 07:20:33 -0700 (Thu, 20 Oct 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_8/madman/Rpacks/genoCN
Last Changed Rev: 54800 / Revision: 59457
Last Changed Date: 2011-04-13 15:27:35 -0700 (Wed, 13 Apr 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: genoCN
Version: 1.4.0
Command: rm -rf genoCN.buildbin-libdir && mkdir genoCN.buildbin-libdir && E:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD INSTALL --build --no-multiarch --library=genoCN.buildbin-libdir genoCN_1.4.0.tar.gz
StartedAt: 2011-10-20 17:50:18 -0700 (Thu, 20 Oct 2011)
EndedAt: 2011-10-20 17:50:27 -0700 (Thu, 20 Oct 2011)
EllapsedTime: 9.0 seconds
RetCode: 0
Status:  OK  
PackageFile: genoCN_1.4.0.zip
PackageFileSize: 1.132 MiB

Command output

* installing *source* package 'genoCN' ...
** libs
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include"          -O3 -Wall  -std=gnu99 -c tnorm_mle.c -o tnorm_mle.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include"          -O3 -Wall  -std=gnu99 -c utility.c -o utility.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include"          -O3 -Wall  -std=gnu99 -c xCNV.c -o xCNV.o
xCNV.c: In function 'emiss':
xCNV.c:317:25: warning: unused variable 'k'
xCNV.c:317:16: warning: unused variable 'K'
xCNV.c: In function 'baum_welch':
xCNV.c:787:20: warning: unused variable 'sd_b_tmp'
xCNV.c:787:10: warning: unused variable 'mu_b_tmp'
xCNV.c:768:31: warning: 'nGtp' may be used uninitialized in this function
xCNV.c:769:18: warning: 'pbf' may be used uninitialized in this function
gcc -shared -s -static-libgcc -o genoCN.dll tmp.def tnorm_mle.o utility.o xCNV.o -LE:/biocbld/bbs-2.8-bioc/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.8-bioc/meat/genoCN.buildbin-libdir/genoCN/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'genoCN' as genoCN_1.4.0.zip

* DONE (genoCN)