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Package 147/467HostnameOS / ArchBUILDCHECKBUILD BIN
flowClust 2.10.0
Raphael Gottardo
Snapshot Date: 2011-10-20 07:20:33 -0700 (Thu, 20 Oct 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_8/madman/Rpacks/flowClust
Last Changed Rev: 56241 / Revision: 59457
Last Changed Date: 2011-06-16 15:04:11 -0700 (Thu, 16 Jun 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  WARNINGS [ OK ]
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 

Summary

Package: flowClust
Version: 2.10.0
Command: rm -rf flowClust.buildbin-libdir && mkdir flowClust.buildbin-libdir && E:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD INSTALL --build --no-multiarch --library=flowClust.buildbin-libdir flowClust_2.10.0.tar.gz
StartedAt: 2011-10-20 17:47:54 -0700 (Thu, 20 Oct 2011)
EndedAt: 2011-10-20 17:48:16 -0700 (Thu, 20 Oct 2011)
EllapsedTime: 21.3 seconds
RetCode: 0
Status:  OK  
PackageFile: flowClust_2.10.0.zip
PackageFileSize: 513.7 KiB

Command output

* installing *source* package 'flowClust' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include"       -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -c BoxCox.c -o BoxCox.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include"       -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -c Nu.c -o Nu.o
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include"       -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -c flowClust.c -o flowClust.o
flowClust.c: In function 'flowClust':
flowClust.c:49:21: warning: 's' may be used uninitialized in this function
flowClust.c:49:25: warning: 's2' may be used uninitialized in this function
flowClust.c:51:23: warning: 's3' may be used uninitialized in this function
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include"       -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -c flowClustGaussian.c -o flowClustGaussian.o
flowClustGaussian.c: In function 'flowClustGaussian':
flowClustGaussian.c:33:21: warning: 's' may be used uninitialized in this function
gcc -I"E:/biocbld/bbs-2.8-bioc/R/include"       -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -c ranMVNT.c -o ranMVNT.o
gcc -shared -s -static-libgcc -o flowClust.dll tmp.def BoxCox.o Nu.o flowClust.o flowClustGaussian.o ranMVNT.o -LC:/GSL/i386/lib -lgsl -lgslcblas -lm -LE:/biocbld/bbs-2.8-bioc/R/bin/i386 -lR
Info: resolving _gsl_root_fsolver_brent by linking to __imp__gsl_root_fsolver_brent (auto-import)
Info: resolving _gsl_min_fminimizer_brent by linking to __imp__gsl_min_fminimizer_brent (auto-importc:/rtools214/mingw/bin/../lib/gcc/mingw32/4.5.0/../../../../mingw32/bin/ld.exe: warning: auto-importing has been activated without --enable-auto-import specified on the command line.
This should work unless it involves constant data structures referencing symbols from auto-imported DLLs.)

installing to E:/biocbld/bbs-2.8-bioc/meat/flowClust.buildbin-libdir/flowClust/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Scalable Robust Estimators with High Breakdown Point (version 1.3-01)
Warning: Class "Ulist" is defined (with package slot 'rrcov') but no metadata object found to revise subclass information---not exported?  Making a copy in package 'flowClust'
Warning: Class "Uvector" is defined (with package slot 'rrcov') but no metadata object found to revise subclass information---not exported?  Making a copy in package 'flowClust'
** help
*** installing help indices
** building package indices ...
Warning: value of 'results' option should be lowercase
Warning: value of 'results' option should be lowercase
** testing if installed package can be loaded
Scalable Robust Estimators with High Breakdown Point (version 1.3-01)
* MD5 sums
packaged installation of 'flowClust' as flowClust_2.10.0.zip

* DONE (flowClust)