a4Core 1.1.3
Tobias Verbeke
| Snapshot Date: 2011-10-20 07:20:33 -0700 (Thu, 20 Oct 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_8/madman/Rpacks/a4Core | | Last Changed Rev: 56038 / Revision: 59457 | | Last Changed Date: 2011-06-08 02:23:06 -0700 (Wed, 08 Jun 2011) |
| lamb1 | Linux (openSUSE 11.3) / x86_64 | OK | [ WARNINGS ] | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | WARNINGS | OK |
| gewurz | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | WARNINGS | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | WARNINGS | OK |
* using log directory ‘/loc/home/biocbuild/bbs-2.8-bioc/meat/a4Core.Rcheck’
* using R version 2.13.2 (2011-09-30)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘a4Core/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘a4Core’ version ‘1.1.3’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘a4Core’ can be installed ... WARNING
Found the following significant warnings:
Warning: replacing previous import ‘head’ when loading ‘utils’
Warning: replacing previous import ‘tail’ when loading ‘utils’
See ‘/loc/home/biocbuild/bbs-2.8-bioc/meat/a4Core.Rcheck/00install.out’ for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented S4 methods:
generic 'topTable' and siglist 'elnet'
generic 'topTable' and siglist 'lognet'
All user-level objects in a package (including S4 classes and methods)
should have documentation entries.
See the chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
WARNING: There were 2 warnings, see
‘/loc/home/biocbuild/bbs-2.8-bioc/meat/a4Core.Rcheck/00check.log’
for details
* installing *source* package ‘a4Core’ ...
** R
** inst
** preparing package for lazy loading
Warning: replacing previous import ‘head’ when loading ‘utils’
Warning: replacing previous import ‘tail’ when loading ‘utils’
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Warning messages:
1: replacing previous import ‘head’ when loading ‘utils’
2: replacing previous import ‘tail’ when loading ‘utils’
* DONE (a4Core)