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Package 215/436HostnameOS / ArchBUILDCHECKBUILD BIN
impute 1.25.0
Balasubramanian Narasimhan
Snapshot Date: 2011-02-24 11:26:35 -0800 (Thu, 24 Feb 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/impute
Last Changed Rev: 50295 / Revision: 53255
Last Changed Date: 2010-10-17 22:57:44 -0700 (Sun, 17 Oct 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]
petty Mac OS X Snow Leopard (10.6.4) / i386  OK  OK  OK 

Summary

Package: impute
Version: 1.25.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh impute_1.25.0.tar.gz /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R impute.buildbin-libdir
StartedAt: 2011-02-24 22:05:56 -0800 (Thu, 24 Feb 2011)
EndedAt: 2011-02-24 22:05:58 -0800 (Thu, 24 Feb 2011)
EllapsedTime: 2.8 seconds
RetCode: 0
Status:  OK 
PackageFile: impute_1.25.0.tgz
PackageFileSize: 1.152 MiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=impute.buildbin-libdir impute_1.25.0.tar.gz'
>>>>>>> 

* installing *source* package ‘impute’ ...
** libs
*** arch - i386
gfortran -arch i386   -fPIC  -g -O2 -Wall -pedantic -c knnimpute.f -o knnimpute.o
Warning: Nonconforming tab character in column 1 of line 89
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knnimpute.f: In function ‘twomis’:
knnimpute.f:132: warning: ‘dold’ may be used uninitialized in this function
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o impute.so knnimpute.o -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/impute.buildbin-libdir/impute/libs/i386
*** arch - ppc
gfortran -arch ppc   -fPIC  -g -O2 -Wall -pedantic -c knnimpute.f -o knnimpute.o
Warning: Nonconforming tab character in column 1 of line 89
Warning: Nonconforming tab character in column 1 of line 91
Warning: Nonconforming tab character in column 1 of line 92
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Warning: Nonconforming tab character in column 1 of line 122
knnimpute.f: In function ‘twomis’:
knnimpute.f:132: warning: ‘dold’ may be used uninitialized in this function
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o impute.so knnimpute.o -lgfortran -lSystemStubs -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/impute.buildbin-libdir/impute/libs/ppc
*** arch - x86_64
gfortran -arch x86_64   -fPIC  -g -O2 -Wall -pedantic -c knnimpute.f -o knnimpute.o
Warning: Nonconforming tab character in column 1 of line 89
Warning: Nonconforming tab character in column 1 of line 91
Warning: Nonconforming tab character in column 1 of line 92
Warning: Nonconforming tab character in column 1 of line 93
Warning: Nonconforming tab character in column 1 of line 94
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Warning: Nonconforming tab character in column 1 of line 122
knnimpute.f: In function ‘twomis’:
knnimpute.f:132: warning: ‘dold’ may be used uninitialized in this function
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o impute.so knnimpute.o -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/impute.buildbin-libdir/impute/libs/x86_64
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (impute)


>>>>>>> 
>>>>>>> FIXING LINKS FOR impute.buildbin-libdir/impute/libs/i386/impute.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "impute.buildbin-libdir/impute/libs/i386/impute.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "impute.buildbin-libdir/impute/libs/i386/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "impute.buildbin-libdir/impute/libs/i386/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "impute.buildbin-libdir/impute/libs/i386/impute.so"


>>>>>>> 
>>>>>>> FIXING LINKS FOR impute.buildbin-libdir/impute/libs/ppc/impute.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "impute.buildbin-libdir/impute/libs/ppc/impute.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "impute.buildbin-libdir/impute/libs/ppc/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "impute.buildbin-libdir/impute/libs/ppc/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "impute.buildbin-libdir/impute/libs/ppc/impute.so"


>>>>>>> 
>>>>>>> FIXING LINKS FOR impute.buildbin-libdir/impute/libs/x86_64/impute.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "impute.buildbin-libdir/impute/libs/x86_64/impute.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "impute.buildbin-libdir/impute/libs/x86_64/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "impute.buildbin-libdir/impute/libs/x86_64/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "impute.buildbin-libdir/impute/libs/x86_64/impute.so"