Back to the "Multiple platform build/check report" A  B  C  D  E  F  G [H] I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 206/436HostnameOS / ArchBUILDCHECKBUILD BIN
HTqPCR 1.5.3
Heidi Dvinge
Snapshot Date: 2011-02-24 11:26:35 -0800 (Thu, 24 Feb 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/HTqPCR
Last Changed Rev: 52078 / Revision: 53255
Last Changed Date: 2011-01-26 08:35:09 -0800 (Wed, 26 Jan 2011)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.4) / i386  OK  OK  OK 

Summary

Package: HTqPCR
Version: 1.5.3
Command: E:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD check --no-vignettes --timings HTqPCR_1.5.3.tar.gz
StartedAt: 2011-02-24 18:27:57 -0800 (Thu, 24 Feb 2011)
EndedAt: 2011-02-24 18:29:05 -0800 (Thu, 24 Feb 2011)
EllapsedTime: 67.4 seconds
RetCode: 0
Status:  OK  
CheckDir: HTqPCR.Rcheck
Warnings: 0

Command output

* using log directory 'E:/biocbld/bbs-2.8-bioc/meat/HTqPCR.Rcheck'
* using R version 2.13.0 Under development (unstable) (2011-01-10 r53950)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'HTqPCR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'HTqPCR' version '1.5.3'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'HTqPCR' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

HTqPCR.Rcheck/00install.out:

* installing *source* package 'HTqPCR' ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Creating a new generic function for "summary" in "HTqPCR"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (HTqPCR)

HTqPCR.Rcheck/HTqPCR-Ex.timings:

nameusersystemelapsed
HTqPCR-package2.690.002.77
cbind0.020.000.02
changeCtLayout0.000.030.03
clusterCt0.500.010.51
filterCategory0.070.020.10
filterCtData0.190.020.20
heatmapSig1.460.001.49
limmaCtData0.770.010.78
mannwhitneyCtData1.290.001.30
normalizeCtData0.440.000.50
plotCVBoxes0.170.000.17
plotCtArray0.170.000.17
plotCtBoxes0.070.000.07
plotCtCard0.060.000.06
plotCtCategory2.520.002.51
plotCtCor0.040.000.05
plotCtDensity0.050.000.05
plotCtHeatmap2.970.003.00
plotCtHistogram0.010.000.01
plotCtOverview0.080.020.11
plotCtPCA0.050.000.05
plotCtPairs0.730.000.73
plotCtRQ0.350.000.36
plotCtReps0.140.000.14
plotCtScatter0.030.000.04
plotCtSignificance0.370.000.37
plotCtVariation0.770.000.80
plotGenes0.030.000.03
qPCRpros0.000.010.01
qPCRraw000
qPCRset-class0.020.020.04
readCtData0.070.000.07
setCategory4.350.014.44
ttestCtData101