Back to the "Multiple platform build/check report"

Package 20/92HostnameOS / ArchBUILDCHECKBUILD BIN
CLL 1.2.8
Robert Gentleman
Snapshot Date: 2011-04-06 12:27:26 -0700 (Wed, 06 Apr 2011)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/CLL
Last Changed Rev: 1063 / Revision: 1510
Last Changed Date: 2009-10-13 23:47:36 -0700 (Tue, 13 Oct 2009)
lamb2 Linux (openSUSE 11.2) / x86_64  OK [ OK ]
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.6) / i386  OK  OK  OK 

Summary

Package: CLL
Version: 1.2.8
Command: /home/biocbuild/bbs-2.7-bioc/R/bin/R CMD check --no-vignettes --timings CLL_1.2.8.tar.gz
StartedAt: 2011-04-06 14:11:53 -0700 (Wed, 06 Apr 2011)
EndedAt: 2011-04-06 14:12:42 -0700 (Wed, 06 Apr 2011)
EllapsedTime: 48.6 seconds
RetCode: 0
Status:  OK 
CheckDir: CLL.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.7-data-experiment/meat/CLL.Rcheck’
* using R version 2.12.2 (2011-02-25)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘CLL/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘CLL’ version ‘1.2.8’
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘CLL’ can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

CLL.Rcheck/00install.out:

* installing *source* package ‘CLL’ ...
** R
** data
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (CLL)

CLL.Rcheck/CLL-Ex.timings:

nameusersystemelapsed
CLL-package0.1320.0000.132
CLLbatch3.6880.1203.808
disease0.0000.0000.001
nsFilter0.3000.0120.313
sCLLex0.0680.0000.066
sFiltert0.0840.0040.090
sFiltertBH0.0880.0040.089