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Package 296/419HostnameOS / ArchBUILDCHECKBUILD BIN
pcaMethods 1.32.0
Wolfram Stacklies
Snapshot Date: 2011-04-06 23:24:01 -0700 (Wed, 06 Apr 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/pcaMethods
Last Changed Rev: 50293 / Revision: 54588
Last Changed Date: 2010-10-17 22:34:23 -0700 (Sun, 17 Oct 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ ERROR ] skipped  skipped 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 

Summary

Package: pcaMethods
Version: 1.32.0
Command: chmod a+r pcaMethods -R && E:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD build --keep-empty-dirs pcaMethods
StartedAt: 2011-04-07 03:42:49 -0700 (Thu, 07 Apr 2011)
EndedAt: 2011-04-07 03:42:59 -0700 (Thu, 07 Apr 2011)
EllapsedTime: 9.9 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

Warning: unknown option '--keep-empty-dirs'
* checking for file 'pcaMethods/DESCRIPTION' ... OK
* preparing 'pcaMethods':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
      -----------------------------------
* installing *source* package 'pcaMethods' ...
** libs
g++ -I"E:/biocbld/BBS-2˜1.7-B/R/include" -IE:/biocbld/BBS-2˜1.7-B/R/library/Rcpp/include        -O2 -Wall  -c nipals.cpp -o nipals.o
nipals.cpp: In function 'SEXPREC* Nipals(SEXPREC*, SEXPREC*)':
nipals.cpp:37:5: error: 'RcppParams' was not declared in this scope
nipals.cpp:37:16: error: expected ';' before 'rparams'
nipals.cpp:38:20: error: 'rparams' was not declared in this scope
nipals.cpp:42:5: error: 'RcppMatrix' was not declared in this scope
nipals.cpp:42:16: error: expected primary-expression before 'double'
nipals.cpp:42:16: error: expected ';' before 'double'
nipals.cpp:43:16: error: expected primary-expression before 'double'
nipals.cpp:43:16: error: expected ';' before 'double'
nipals.cpp:44:14: error: 'mat' was not declared in this scope
nipals.cpp:46:16: error: expected primary-expression before 'double'
nipals.cpp:46:16: error: expected ';' before 'double'
nipals.cpp:47:16: error: expected primary-expression before 'double'
nipals.cpp:47:16: error: expected ';' before 'double'
nipals.cpp:48:16: error: expected primary-expression before 'double'
nipals.cpp:48:16: error: expected ';' before 'double'
nipals.cpp:120:18: error: 'est_mat' was not declared in this scope
nipals.cpp:121:20: error: 'omat' was not declared in this scope
nipals.cpp:130:9: error: 'tt' was not declared in this scope
nipals.cpp:133:9: error: 'pp' was not declared in this scope
nipals.cpp:146:5: error: 'RcppResultSet' was not declared in this scope
nipals.cpp:146:19: error: expected ';' before 'rs'
nipals.cpp:148:18: error: expected primary-expression before 'double'
nipals.cpp:148:18: error: expected ';' before 'double'
nipals.cpp:149:18: error: expected primary-expression before 'double'
nipals.cpp:149:18: error: expected ';' before 'double'
nipals.cpp:152:11: error: 'ttt' was not declared in this scope
nipals.cpp:152:21: error: 'tt' was not declared in this scope
nipals.cpp:157:11: error: 'ppp' was not declared in this scope
nipals.cpp:157:21: error: 'pp' was not declared in this scope
nipals.cpp:160:7: error: 'rs' was not declared in this scope
nipals.cpp:160:24: error: 'ttt' was not declared in this scope
nipals.cpp:161:26: error: 'ppp' was not declared in this scope
nipals.cpp:163:7: error: 'rs' was not declared in this scope
nipals.cpp:163:24: error: 'tt' was not declared in this scope
nipals.cpp:164:26: error: 'pp' was not declared in this scope
nipals.cpp:166:5: error: 'rs' was not declared in this scope
nipals.cpp:170:69: error: 'copyMessageToR' was not declared in this scope
nipals.cpp:172:53: error: 'copyMessageToR' was not declared in this scope
nipals.cpp:175:45: error: 'copyMessageToR' was not declared in this scope
nipals.cpp:177:51: error: 'copyMessageToR' was not declared in this scope
make: *** [nipals.o] Error 1
ERROR: compilation failed for package 'pcaMethods'
* removing 'E:/biocbld/bbs-2.7-bioc/tmpdir/RtmpJl7uuO/Rinst6e3d7df3/pcaMethods'
      -----------------------------------
ERROR: Installation failed
Removing installation dir