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Package 270/419HostnameOS / ArchBUILDCHECKBUILD BIN
multtest 2.6.0
Katherine S. Pollard
Snapshot Date: 2011-04-06 23:24:01 -0700 (Wed, 06 Apr 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/multtest
Last Changed Rev: 50293 / Revision: 54588
Last Changed Date: 2010-10-17 22:34:23 -0700 (Sun, 17 Oct 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK [ OK ] OK 

Summary

Package: multtest
Version: 2.6.0
Command: D:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD check --no-vignettes --timings multtest_2.6.0.tar.gz
StartedAt: 2011-04-07 11:54:58 -0700 (Thu, 07 Apr 2011)
EndedAt: 2011-04-07 11:56:35 -0700 (Thu, 07 Apr 2011)
EllapsedTime: 97.2 seconds
RetCode: 0
Status:  OK  
CheckDir: multtest.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.7-bioc/meat/multtest.Rcheck'
* using R version 2.12.2 (2011-02-25)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'multtest/DESCRIPTION' ... OK
* this is package 'multtest' version '2.6.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'multtest' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

multtest.Rcheck/00install.out:

* installing *source* package 'multtest' ...
** libs
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c Rpack.c -o Rpack.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c VScount.c -o VScount.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c block_sampling_fixed.c -o block_sampling_fixed.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c bootloop.c -o bootloop.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c mt.c -o mt.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c pairt_sampling.c -o pairt_sampling.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c pairt_sampling_fixed.c -o pairt_sampling_fixed.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c random.c -o random.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c sampling.c -o sampling.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c sampling_fixed.c -o sampling_fixed.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c stat_func.c -o stat_func.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/BBS-2˜1.7-B/R/include"      -DUSEDOUBLE -DWINDOWS   -O2 -Wall  -std=gnu99 -c stat_order.c -o stat_order.o
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o multtest.dll tmp.def Rpack.o VScount.o block_sampling_fixed.o bootloop.o mt.o pairt_sampling.o pairt_sampling_fixed.o random.o sampling.o sampling_fixed.o stat_func.o stat_order.o -lm -LD:/biocbld/BBS-2˜1.7-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.7-bioc/meat/multtest.Rcheck/multtest/libs/x64
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Creating a new generic function for "as.list" in "multtest"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (multtest)

multtest.Rcheck/multtest-Ex.timings:

nameusersystemelapsed
EBMTP-class000
EBMTP0.330.000.33
Hsets0.280.000.28
MTP-class000
MTP0.480.000.49
boot.null0.100.000.09
corr.null0.030.000.09
fwer2gfwer4.610.004.61
get.index1.010.001.02
meanX000
mt.maxT4.830.044.87
mt.plot0.410.000.41
mt.rawp2adjp0.310.020.33
mt.reject0.330.000.33
mt.sample.teststat0.060.000.06
mt.teststat0.310.000.31
ss.maxT000
wapply000