Back to the "Multiple platform build/check report" A  B  C  D  E  F [G] H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 181/419HostnameOS / ArchBUILDCHECKBUILD BIN
globaltest 5.4.0
Jelle Goeman
Snapshot Date: 2011-04-06 23:24:01 -0700 (Wed, 06 Apr 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/globaltest
Last Changed Rev: 50293 / Revision: 54588
Last Changed Date: 2010-10-17 22:34:23 -0700 (Sun, 17 Oct 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  OK [ WARNINGS ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  WARNINGS  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  WARNINGS  OK 

Summary

Package: globaltest
Version: 5.4.0
Command: /home/biocbuild/bbs-2.7-bioc/R/bin/R CMD check --no-vignettes --timings globaltest_5.4.0.tar.gz
StartedAt: 2011-04-07 06:53:51 -0700 (Thu, 07 Apr 2011)
EndedAt: 2011-04-07 06:55:52 -0700 (Thu, 07 Apr 2011)
EllapsedTime: 121.1 seconds
RetCode: 0
Status:  WARNINGS 
CheckDir: globaltest.Rcheck
Warnings: 1

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.7-bioc/meat/globaltest.Rcheck’
* using R version 2.12.2 (2011-02-25)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘globaltest/DESCRIPTION’ ... OK
* this is package ‘globaltest’ version ‘5.4.0’
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘globaltest’ can be installed ... WARNING
Found the following significant warnings:
  Warning: use of a true value for 'ZipData' is deprecated
See ‘/loc/home/biocbuild/bbs-2.7-bioc/meat/globaltest.Rcheck/00install.out’ for details.
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in ‘inst/doc’ ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning, see
  ‘/loc/home/biocbuild/bbs-2.7-bioc/meat/globaltest.Rcheck/00check.log’
for details

globaltest.Rcheck/00install.out:

* installing *source* package ‘globaltest’ ...
** R
** data
Warning: use of a true value for 'ZipData' is deprecated
** inst
** preparing package for lazy loading
Creating a new generic function for "sort" in "globaltest"
Creating a new generic function for "model.matrix" in "globaltest"
Creating a new generic function for "coefficients" in "globaltest"
Creating a new generic function for "fitted.values" in "globaltest"
Creating a new generic function for "residuals" in "globaltest"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (globaltest)

globaltest.Rcheck/globaltest-Ex.timings:

nameusersystemelapsed
comparative3.2280.0083.244
diagnostics0.6440.0040.647
genesettesting000
gt0.7800.0120.792
gt.object-class0.4960.0200.515
gtoptions000
mlogit0.0160.0000.016
multtest0.3520.0040.354
v4_checkerboard0.0720.0000.073
v4_geneplot0.4360.0040.438
v4_globaltest4.0200.0484.067
v4_multtest0.4320.0000.433
v4_permutations1.9320.0201.955
v4_regressionplot1.1080.0001.109
v4_sampleplot0.4200.0040.425
v4_sampling27.474 0.00427.486