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Package 296/419HostnameOS / ArchBUILDCHECKBUILD BIN
pcaMethods 1.32.0
Wolfram Stacklies
Snapshot Date: 2011-03-30 23:22:56 -0700 (Wed, 30 Mar 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/pcaMethods
Last Changed Rev: 50293 / Revision: 54281
Last Changed Date: 2010-10-17 22:34:23 -0700 (Sun, 17 Oct 2010)
lamb2 Linux (openSUSE 11.2) / x86_64 [ ERROR ] skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  ERROR  skipped  skipped 

Summary

Package: pcaMethods
Version: 1.32.0
Command: /home/biocbuild/bbs-2.7-bioc/R/bin/R CMD build pcaMethods
StartedAt: 2011-03-31 01:49:35 -0700 (Thu, 31 Mar 2011)
EndedAt: 2011-03-31 01:49:38 -0700 (Thu, 31 Mar 2011)
EllapsedTime: 3.5 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

* checking for file ‘pcaMethods/DESCRIPTION’ ... OK
* preparing ‘pcaMethods’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
      -----------------------------------
* installing *source* package ‘pcaMethods’ ...
** libs
g++ -I/home/biocbuild/bbs-2.7-bioc/R/include -I/loc/home/biocbuild/bbs-2.7-bioc/R/library/Rcpp/include -I/usr/local/include    -fpic  -g -O2 -c nipals.cpp -o nipals.o
nipals.cpp: In function ‘SEXPREC* Nipals(SEXPREC*, SEXPREC*)’:
nipals.cpp:37: error: ‘RcppParams’ was not declared in this scope
nipals.cpp:37: error: expected ‘;’ before ‘rparams’
nipals.cpp:38: error: ‘rparams’ was not declared in this scope
nipals.cpp:42: error: ‘RcppMatrix’ was not declared in this scope
nipals.cpp:42: error: expected primary-expression before ‘double’
nipals.cpp:42: error: expected ‘;’ before ‘double’
nipals.cpp:43: error: expected primary-expression before ‘double’
nipals.cpp:43: error: expected ‘;’ before ‘double’
nipals.cpp:44: error: ‘mat’ was not declared in this scope
nipals.cpp:46: error: expected primary-expression before ‘double’
nipals.cpp:46: error: expected ‘;’ before ‘double’
nipals.cpp:47: error: expected primary-expression before ‘double’
nipals.cpp:47: error: expected ‘;’ before ‘double’
nipals.cpp:48: error: expected primary-expression before ‘double’
nipals.cpp:48: error: expected ‘;’ before ‘double’
nipals.cpp:120: error: ‘est_mat’ was not declared in this scope
nipals.cpp:121: error: ‘omat’ was not declared in this scope
nipals.cpp:130: error: ‘tt’ was not declared in this scope
nipals.cpp:133: error: ‘pp’ was not declared in this scope
nipals.cpp:146: error: ‘RcppResultSet’ was not declared in this scope
nipals.cpp:146: error: expected ‘;’ before ‘rs’
nipals.cpp:148: error: expected primary-expression before ‘double’
nipals.cpp:148: error: expected ‘;’ before ‘double’
nipals.cpp:149: error: expected primary-expression before ‘double’
nipals.cpp:149: error: expected ‘;’ before ‘double’
nipals.cpp:152: error: ‘ttt’ was not declared in this scope
nipals.cpp:152: error: ‘tt’ was not declared in this scope
nipals.cpp:157: error: ‘ppp’ was not declared in this scope
nipals.cpp:157: error: ‘pp’ was not declared in this scope
nipals.cpp:160: error: ‘rs’ was not declared in this scope
nipals.cpp:160: error: ‘ttt’ was not declared in this scope
nipals.cpp:161: error: ‘ppp’ was not declared in this scope
nipals.cpp:163: error: ‘rs’ was not declared in this scope
nipals.cpp:163: error: ‘tt’ was not declared in this scope
nipals.cpp:164: error: ‘pp’ was not declared in this scope
nipals.cpp:166: error: ‘rs’ was not declared in this scope
nipals.cpp:170: error: ‘copyMessageToR’ was not declared in this scope
nipals.cpp:172: error: ‘copyMessageToR’ was not declared in this scope
nipals.cpp:175: error: ‘copyMessageToR’ was not declared in this scope
nipals.cpp:177: error: ‘copyMessageToR’ was not declared in this scope
make: *** [nipals.o] Error 1
ERROR: compilation failed for package ‘pcaMethods’
* removing ‘/tmp/RtmpgdCdHw/Rinst5ba3bcc2/pcaMethods’
      -----------------------------------
ERROR: Installation failed
Removing installation dir