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hgu2beta7 1.2.2
Biocore Team c/o BioC user list
Snapshot Date: 2010-09-24 00:28:34 -0700 (Fri, 24 Sep 2010)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/hgu2beta7
Last Changed Rev: 782 / Revision: 1309
Last Changed Date: 2009-05-08 12:29:52 -0700 (Fri, 08 May 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: hgu2beta7
Version: 1.2.2
Command: E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD check --no-vignettes --timings hgu2beta7_1.2.2.tar.gz
StartedAt: 2010-09-24 04:32:43 -0700 (Fri, 24 Sep 2010)
EndedAt: 2010-09-24 04:34:21 -0700 (Fri, 24 Sep 2010)
EllapsedTime: 98.0 seconds
RetCode: 0
Status:  OK  
CheckDir: hgu2beta7.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.6-data-experiment/meat/hgu2beta7.Rcheck'
* using R version 2.11.1 (2010-05-31)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'hgu2beta7/DESCRIPTION' ... OK
* this is package 'hgu2beta7' version '1.2.2'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'hgu2beta7' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

hgu2beta7.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'hgu2beta7' ...
** R
** data
**  moving datasets to lazyload DB
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (hgu2beta7)

hgu2beta7.Rcheck/hgu2beta7-Ex.timings:

nameusersystemelapsed
hgu2beta7ACCNUM0.420.000.42
hgu2beta7CHR0.210.000.20
hgu2beta7CHRLENGTHS000
hgu2beta7CHRLOC0.340.000.34
hgu2beta7ENZYME0.280.000.28
hgu2beta7ENZYME2PROBE000
hgu2beta7GENENAME0.30.00.3
hgu2beta7GO2.090.022.11
hgu2beta7GO2ALLPROBES0.470.030.50
hgu2beta7GO2PROBE0.080.000.08
hgu2beta7GRIF0.170.010.19
hgu2beta7LOCUSID0.140.000.14
hgu2beta7MAP0.160.000.16
hgu2beta7OMIM0.170.000.17
hgu2beta7ORGANISM000
hgu2beta7PATH0.150.000.15
hgu2beta7PATH2PROBE000
hgu2beta7PMID0.610.000.61
hgu2beta7PMID2PROBE1.550.021.56
hgu2beta7REFSEQ0.640.000.64
hgu2beta7SUMFUNC0.620.000.63
hgu2beta7SYMBOL0.230.000.23
hgu2beta7UNIGENE0.320.000.31