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XhybCasneuf 1.0.6
Tineke Casneuf
Snapshot Date: 2010-09-24 00:28:34 -0700 (Fri, 24 Sep 2010)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/XhybCasneuf
Last Changed Rev: 986 / Revision: 1309
Last Changed Date: 2009-09-15 12:41:50 -0700 (Tue, 15 Sep 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: XhybCasneuf
Version: 1.0.6
Command: /home/biocbuild/bbs-2.6-bioc/R/bin/R CMD check --no-vignettes --timings XhybCasneuf_1.0.6.tar.gz
StartedAt: 2010-09-24 03:03:26 -0700 (Fri, 24 Sep 2010)
EndedAt: 2010-09-24 03:04:25 -0700 (Fri, 24 Sep 2010)
EllapsedTime: 59.5 seconds
RetCode: 0
Status:  OK 
CheckDir: XhybCasneuf.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.6-data-experiment/meat/XhybCasneuf.Rcheck'
* using R version 2.11.1 (2010-05-31)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'XhybCasneuf/DESCRIPTION' ... OK
* this is package 'XhybCasneuf' version '1.0.6'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'XhybCasneuf' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

XhybCasneuf.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'XhybCasneuf' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.


Attaching package: 'tinesath1cdf'

The following object(s) are masked from 'package:ath1121501cdf':

    i2xy, xy2i

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (XhybCasneuf)

XhybCasneuf.Rcheck/XhybCasneuf-Ex.timings:

nameusersystemelapsed
AffysTissue0.4680.0120.479
CustomsTissue0.3400.0000.339
XhybExamples-class0.0480.0040.053
ex10.0400.0200.059
runSimulation0.0560.0000.059