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Neve2006 0.1.9
VJ Carey
Snapshot Date: 2010-09-24 00:28:34 -0700 (Fri, 24 Sep 2010)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/Neve2006
Last Changed Rev: 983 / Revision: 1309
Last Changed Date: 2009-09-15 12:05:10 -0700 (Tue, 15 Sep 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: Neve2006
Version: 0.1.9
Command: /home/biocbuild/bbs-2.6-bioc/R/bin/R CMD check --no-vignettes --timings Neve2006_0.1.9.tar.gz
StartedAt: 2010-09-24 02:58:21 -0700 (Fri, 24 Sep 2010)
EndedAt: 2010-09-24 02:59:14 -0700 (Fri, 24 Sep 2010)
EllapsedTime: 53.5 seconds
RetCode: 0
Status:  OK 
CheckDir: Neve2006.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.6-data-experiment/meat/Neve2006.Rcheck'
* using R version 2.11.1 (2010-05-31)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'Neve2006/DESCRIPTION' ... OK
* this is package 'Neve2006' version '0.1.9'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'Neve2006' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

Neve2006.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'Neve2006' ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: AnnotationDbi
Loading required package: org.Hs.eg.db
Loading required package: DBI
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (Neve2006)

Neve2006.Rcheck/Neve2006-Ex.timings:

nameusersystemelapsed
cghExSet-class0.3880.0120.401
logRatios0.0400.0000.042
neveCGHmatch0.3640.0200.385