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Package 128/389HostnameOS / ArchBUILDCHECKBUILD BIN
flowQ 1.8.0
F. Hahne
Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/flowQ
Last Changed Rev: 46401 / Revision: 49923
Last Changed Date: 2010-04-22 11:21:23 -0700 (Thu, 22 Apr 2010)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64 [ ERROR ] skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: flowQ
Version: 1.8.0
Command: chmod a+r flowQ -R && D:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD build flowQ
StartedAt: 2010-10-04 14:03:09 -0700 (Mon, 04 Oct 2010)
EndedAt: 2010-10-04 14:03:32 -0700 (Mon, 04 Oct 2010)
EllapsedTime: 23.1 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'flowQ/DESCRIPTION' ... OK
* preparing 'flowQ':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* installing *source* package 'flowQ' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: flowCore
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: rrcov
Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
Scalable Robust Estimators with High Breakdown Point (version 1.1-00)

Attaching package: 'flowCore'

The following object(s) are masked from 'package:stats':

    alias, filter

KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Loading required package: KernSmooth
Loading required package: tools

Attaching package: 'latticeExtra'

The following object(s) are masked from 'package:flowViz':

    ecdfplot

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Using ImageMagic library at NA
(version NA)

* DONE (flowQ)
* creating vignettes ... ERROR
Loading required package: outliers
Loading required package: lattice
Loading required package: flowViz
Loading required package: flowCore
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: rrcov
Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm

Attaching package: 'flowCore'

The following object(s) are masked from 'package:stats':

    alias, filter

KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Loading required package: mvoutlier
Loading required package: bioDist
Loading required package: KernSmooth
Loading required package: parody
Loading required package: RColorBrewer
Loading required package: latticeExtra

Attaching package: 'latticeExtra'

The following object(s) are masked from 'package:flowViz':

    ecdfplot


Error: processing vignette 'DataQualityAssessment.Rnw' failed with diagnostics:
 chunk 1 (label=cellnum) 
Error in strsplit(iInf, " ")[[1]] : subscript out of bounds
Execution halted