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Package 114/354HostnameOS / ArchBUILDCHECKBUILD BIN
flowCore 1.13.1
F. Hahne
Bioconductor Changelog
Snapshot Date: 2009-12-07 11:32:00 -0800 (Mon, 07 Dec 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/flowCore
Last Changed Rev: 42847 / Revision: 43434
Last Changed Date: 2009-11-06 12:28:16 -0800 (Fri, 06 Nov 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: flowCore
Version: 1.13.1
Command: E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD build flowCore
StartedAt: 2009-12-07 14:05:14 -0800 (Mon, 07 Dec 2009)
EndedAt: 2009-12-07 14:07:03 -0800 (Mon, 07 Dec 2009)
EllapsedTime: 109.8 seconds
RetCode: 0
Status: OK
PackageFile: flowCore_1.13.1.tar.gz
PackageFileSize: 13.48 MiB

Command output

* checking for file 'flowCore/DESCRIPTION' ... OK
* preparing 'flowCore':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'flowCore' ...
** libs
  making DLL ...
gcc -I"e:/biocbld/bbs-2.6-bioc/R/include"        -O3 -Wall  -std=gnu99 -c biexponential.c -o biexponential.o
gcc -I"e:/biocbld/bbs-2.6-bioc/R/include"        -O3 -Wall  -std=gnu99 -c inPolygon.c -o inPolygon.o
gcc -I"e:/biocbld/bbs-2.6-bioc/R/include"        -O3 -Wall  -std=gnu99 -c inPolytope.c -o inPolytope.o
gcc -I"e:/biocbld/bbs-2.6-bioc/R/include"        -O3 -Wall  -std=gnu99 -c init.c -o init.o
gcc -shared -s -o flowCore.dll tmp.def biexponential.o inPolygon.o inPolytope.o init.o -Le:/biocbld/bbs-2.6-bioc/R/bin -lR
  ... done
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
pcaPP 0.1-1 loaded
Scalable Robust Estimators with High Breakdown Point (version 1.0-00)
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "array" of class "matrix" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "mts" of class "matrix" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "signature" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "ObjectsWithPackage" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "signature" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "ObjectsWithPackage" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "signature" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "ObjectsWithPackage" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "integer" of class "numeric" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "ordered" of class "numeric" is not local and cannot be updated for new inheritance information; consider setClassUnion()
** help
*** installing help indices
** building package indices ...
** MD5 sums
* DONE (flowCore)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'flowCore_1.13.1.tar.gz'