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Package 114/353HostnameOS / ArchBUILDCHECKBUILD BIN
flowCore 1.12.0
F. Hahne
Snapshot Date: 2010-04-02 23:28:25 -0700 (Fri, 02 Apr 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/flowCore
Last Changed Rev: 42684 / Revision: 45705
Last Changed Date: 2009-10-27 16:33:29 -0700 (Tue, 27 Oct 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 
Package: flowCore
Version: 1.12.0
Command: E:\biocbld\bbs-2.5-bioc\R\bin\R.exe CMD INSTALL --build --library=flowCore.buildbin-libdir flowCore_1.12.0.tar.gz
StartedAt: 2010-04-03 07:07:25 -0700 (Sat, 03 Apr 2010)
EndedAt: 2010-04-03 07:07:54 -0700 (Sat, 03 Apr 2010)
EllapsedTime: 29.4 seconds
RetCode: 0
Status: OK
PackageFile: flowCore_1.12.0.zip
PackageFileSize: 11.32 MiB

Command output

* installing *source* package 'flowCore' ...

  Using auto-selected zip option '--use-zip-data'

** libs
  making DLL ...
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c biexponential.c -o biexponential.o
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c inPolygon.c -o inPolygon.o
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c inPolytope.c -o inPolytope.o
gcc -I"E:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c init.c -o init.o
gcc -shared -s -o flowCore.dll tmp.def biexponential.o inPolygon.o inPolytope.o init.o -LE:/biocbld/bbs-2.5-bioc/R/bin -lR
  ... done
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
Scalable Robust Estimators with High Breakdown Point (version 1.0-00)
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "array" of class "matrix" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "mts" of class "matrix" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "signature" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "ObjectsWithPackage" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "signature" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "ObjectsWithPackage" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "signature" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "ObjectsWithPackage" of class "character" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "integer" of class "numeric" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning in .checkSubclasses(class1, classDef, class2, classDef2, where1,  :
  Subclass "ordered" of class "numeric" is not local and cannot be updated for new inheritance information; consider setClassUnion()
** help
*** installing help indices
** building package indices ...
** MD5 sums
packaged installation of 'flowCore' as flowCore_1.12.0.zip
* DONE (flowCore)