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Package 36/353HostnameOS / ArchBUILDCHECKBUILD BIN
beadarray 1.14.0
Mark Dunning
Snapshot Date: 2010-04-02 23:28:25 -0700 (Fri, 02 Apr 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/beadarray
Last Changed Rev: 42684 / Revision: 45705
Last Changed Date: 2009-10-27 16:33:29 -0700 (Tue, 27 Oct 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: beadarray
Version: 1.14.0
Command: E:\biocbld\bbs-2.5-bioc\R\bin\R.exe CMD build beadarray
StartedAt: 2010-04-03 02:02:06 -0700 (Sat, 03 Apr 2010)
EndedAt: 2010-04-03 02:02:28 -0700 (Sat, 03 Apr 2010)
EllapsedTime: 21.3 seconds
RetCode: 0
Status: OK
PackageFile: beadarray_1.14.0.tar.gz
PackageFileSize: 9.741 MiB

Command output

* checking for file 'beadarray/DESCRIPTION' ... OK
* preparing 'beadarray':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'beadarray' ...
** libs
  making DLL ...
gcc -I"e:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c BASH.c -o BASH.o
gcc -I"e:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c BLImagePlot.c -o BLImagePlot.o
gcc -I"e:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c HULK.c -o HULK.o
gcc -I"e:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c createBeadSummaryData.c -o createBeadSummaryData.o
createBeadSummaryData.c: In function 'findAllOutliers':
createBeadSummaryData.c:223: warning: 'status' may be used uninitialized in this function
gcc -I"e:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c findProbeIndices.c -o findProbeIndices.o
gcc -I"e:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c readBeadImages.c -o readBeadImages.o
readBeadImages.c: In function 'getPixelIntensities':
readBeadImages.c:368: warning: unused variable 'result'
readBeadImages.c: In function 'calculateBackground':
readBeadImages.c:493: warning: unused variable 'temp'
readBeadImages.c:491: warning: unused variable 'cY'
readBeadImages.c:491: warning: unused variable 'cX'
readBeadImages.c:490: warning: unused variable 'opt4'
readBeadImages.c:490: warning: unused variable 'opt3'
readBeadImages.c:490: warning: unused variable 'opt2'
readBeadImages.c:490: warning: unused variable 'opt1'
readBeadImages.c:490: warning: unused variable 'yc'
readBeadImages.c:490: warning: unused variable 'xc'
readBeadImages.c:489: warning: unused variable 'dist'
readBeadImages.c: In function 'readBeadImage':
readBeadImages.c:626: warning: 'offset' may be used uninitialized in this function
readBeadImages.c:626: warning: 'records' may be used uninitialized in this function
readBeadImages.c:625: warning: 'StripOffset' may be used uninitialized in this function
readBeadImages.c:625: warning: 'ImageHeight' may be used uninitialized in this function
readBeadImages.c:625: warning: 'ImageWidth' may be used uninitialized in this function
readBeadImages.c:625: warning: 'BeginData' may be used uninitialized in this function
gcc -shared -s -o beadarray.dll tmp.def BASH.o BLImagePlot.o HULK.o createBeadSummaryData.o findProbeIndices.o readBeadImages.o -Le:/biocbld/bbs-2.5-bioc/R/bin -lR
  ... done
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
** building package indices ...
** MD5 sums
* DONE (beadarray)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'beadarray_1.14.0.tar.gz'