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Package 147/353HostnameOS / ArchBUILDCHECKBUILD BIN
GEOquery 2.11.3
Sean Davis
Snapshot Date: 2010-04-02 23:28:25 -0700 (Fri, 02 Apr 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/GEOquery
Last Changed Rev: 44618 / Revision: 45705
Last Changed Date: 2010-02-10 06:51:56 -0800 (Wed, 10 Feb 2010)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  ERROR 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: GEOquery
Version: 2.11.3
Command: E:\biocbld\bbs-2.5-bioc\R\bin\R.exe CMD check --no-vignettes GEOquery_2.11.3.tar.gz
StartedAt: 2010-04-03 04:58:16 -0700 (Sat, 03 Apr 2010)
EndedAt: 2010-04-03 04:59:20 -0700 (Sat, 03 Apr 2010)
EllapsedTime: 63.3 seconds
RetCode: 0
Status: OK
CheckDir: GEOquery.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.5-bioc/meat/GEOquery.Rcheck'
* using R version 2.10.1 (2009-12-14)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'GEOquery/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'GEOquery' version '2.11.3'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GEOquery' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: dataTable.Rd:13-14: Dropping empty section \usage
prepare_Rd: dataTable.Rd:15-16: Dropping empty section \arguments
prepare_Rd: dataTable.Rd:17-18: Dropping empty section \details
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

GEOquery.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'GEOquery' ...
** R
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: bitops
** help
*** installing help indices
** building package indices ...
** MD5 sums
* DONE (GEOquery)