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Package 40/353HostnameOS / ArchBUILDCHECKBUILD BIN
BGmix 1.6.0
Alex Lewin
Snapshot Date: 2009-12-13 23:30:35 -0800 (Sun, 13 Dec 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/BGmix
Last Changed Rev: 42684 / Revision: 43539
Last Changed Date: 2009-10-27 16:33:29 -0700 (Tue, 27 Oct 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386 [ OK ] OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: BGmix
Version: 1.6.0
Command: /Library/Frameworks/R.framework/Versions/2.10/Resources/bin/R CMD build BGmix
StartedAt: 2009-12-14 03:04:42 -0800 (Mon, 14 Dec 2009)
EndedAt: 2009-12-14 03:06:00 -0800 (Mon, 14 Dec 2009)
EllapsedTime: 78.0 seconds
RetCode: 0
Status: OK
PackageFile: BGmix_1.6.0.tar.gz
PackageFileSize: 1.216 MiB

Command output

* checking for file 'BGmix/DESCRIPTION' ... OK
* preparing 'BGmix':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* installing the package to re-build vignettes
* installing *source* package ‘BGmix’ ...
checking for gcc... gcc -arch i386 -std=gnu99
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -arch i386 -std=gnu99 accepts -g... yes
checking for gcc -arch i386 -std=gnu99 option to accept ISO C89... none needed
checking for gcc -arch i386 -std=gnu99 option to accept ISO C99... none needed
checking for cos in -lm... yes
Untarring Boost header files...
checking for an ANSI C-conforming const... yes
checking for inline... inline
configure: creating ./config.status
config.status: creating src/Makevars
** libs
** arch - i386
g++ -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I ../boostIncl -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DUSING_R -c BGmix_main.cpp -o BGmix_main.o
g++ -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I ../boostIncl -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DUSING_R -c rundir.cpp -o rundir.o
g++ -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I ../boostIncl -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -DUSING_R -c updates_BGmix.cpp -o updates_BGmix.o
g++ -arch i386 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o BGmix.so BGmix_main.o rundir.o updates_BGmix.o -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
rm -r ../boostIncl 
** R
** data
** inst
** preparing package for lazy loading
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
** help
*** installing help indices
** building package indices ...
* DONE (BGmix)
* creating vignettes ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'BGmix_1.6.0.tar.gz'