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Package 172/319HostnameOS / ArchBUILDCHECKBUILD BIN
maanova 1.14.0
Keith Sheppard
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/maanova
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]
Package: maanova
Version: 1.14.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh maanova_1.14.0.tar.gz /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R maanova.buildbin-libdir
StartedAt: 2009-10-20 19:26:31 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 19:26:40 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 8.2 seconds
RetCode: 0
Status: OK
PackageFile: maanova_1.14.0.tgz
PackageFileSize: 1.49 MiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --preclean --library=maanova.buildbin-libdir maanova_1.14.0.tar.gz'

* Installing *source* package ‘maanova’ ...
** libs
** arch - i386
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -c makeratio.c -o makeratio.o
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -c masvd.c -o masvd.o
masvd.c:114:2: warning: "/*" within comment
masvd.c:154:1: warning: "/*" within comment
masvd.c:161:5: warning: "/*" within comment
masvd.c:165:2: warning: "/*" within comment
masvd.c:189:2: warning: "/*" within comment
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -c shift.c -o shift.o
shift.c: In function ‘shift’:
shift.c:27: warning: unused variable ‘k’
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -c util.c -o util.o
gcc-4.2 -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o maanova.so makeratio.o masvd.o shift.o util.o -L/Library/Frameworks/R.framework/Versions/2.9/Resources/lib/i386 -lRlapack -L/Library/Frameworks/R.framework/Versions/2.9/Resources/lib/i386 -lRblas -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -c makeratio.c -o makeratio.o
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -c masvd.c -o masvd.o
masvd.c:114:2: warning: "/*" within comment
masvd.c:154:1: warning: "/*" within comment
masvd.c:161:5: warning: "/*" within comment
masvd.c:165:2: warning: "/*" within comment
masvd.c:189:2: warning: "/*" within comment
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -c shift.c -o shift.o
shift.c: In function ‘shift’:
shift.c:27: warning: unused variable ‘k’
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -c util.c -o util.o
gcc-4.2 -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o maanova.so makeratio.o masvd.o shift.o util.o -L/Library/Frameworks/R.framework/Versions/2.9/Resources/lib/ppc -lRlapack -L/Library/Frameworks/R.framework/Versions/2.9/Resources/lib/ppc -lRblas -lgfortran -lSystemStubs -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc64
gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c makeratio.c -o makeratio.o
gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c masvd.c -o masvd.o
masvd.c:114:2: warning: "/*" within comment
masvd.c:154:1: warning: "/*" within comment
masvd.c:161:5: warning: "/*" within comment
masvd.c:165:2: warning: "/*" within comment
masvd.c:189:2: warning: "/*" within comment
gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c shift.c -o shift.o
shift.c: In function ‘shift’:
shift.c:27: warning: unused variable ‘k’
gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c util.c -o util.o
gcc-4.2 -arch ppc64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o maanova.so makeratio.o masvd.o shift.o util.o -L/Library/Frameworks/R.framework/Versions/2.9/Resources/lib/ppc64 -lRlapack -L/Library/Frameworks/R.framework/Versions/2.9/Resources/lib/ppc64 -lRblas -lgfortran -lSystemStubs -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - x86_64
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/x86_64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c makeratio.c -o makeratio.o
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/x86_64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c masvd.c -o masvd.o
masvd.c:114:2: warning: "/*" within comment
masvd.c:154:1: warning: "/*" within comment
masvd.c:161:5: warning: "/*" within comment
masvd.c:165:2: warning: "/*" within comment
masvd.c:189:2: warning: "/*" within comment
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/x86_64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c shift.c -o shift.o
shift.c: In function ‘shift’:
shift.c:27: warning: unused variable ‘k’
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/x86_64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c util.c -o util.o
gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o maanova.so makeratio.o masvd.o shift.o util.o -L/Library/Frameworks/R.framework/Versions/2.9/Resources/lib/x86_64 -lRlapack -L/Library/Frameworks/R.framework/Versions/2.9/Resources/lib/x86_64 -lRblas -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'maanova'
     Formats: text html latex example 
  PairContrast                      text    html    latex   example
  Rmaanova.version                  text    html    latex   example
  abf1                              text    html    latex   example
  adjPval                           text    html    latex   example
  arrayview                         text    html    latex   example
  consensus                         text    html    latex   example
  dyeswapfilter                     text    html    latex   example
  fill.missing                      text    html    latex   example
  fitmaanova                        text    html    latex   example
  fom                               text    html    latex   example
  geneprofile                       text    html    latex   example
  gridcheck                         text    html    latex   example
  kidney                            text    html    latex   example
  maanova-internal                  text    html    latex   example
  macluster                         text    html    latex   example
  matest                            text    html    latex   example
  read.madata                       text    html    latex   example
  resiplot                          text    html    latex   example
  riplot                            text    html    latex   example
  subset.madata                     text    html    latex   example
  summarytable                      text    html    latex   example
  transform.madata                  text    html    latex   example
  varplot                           text    html    latex   example
  volcano                           text    html    latex   example
  write.madata                      text    html    latex   example
** building package indices ...
* DONE (maanova)