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Package 167/319HostnameOS / ArchBUILDCHECKBUILD BIN
logicFS 1.14.0
Holger Schwender
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/logicFS
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: logicFS
Version: 1.14.0
Command: /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R CMD check --no-vignettes logicFS_1.14.0.tar.gz
StartedAt: 2009-10-20 18:01:31 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 18:02:09 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 38.1 seconds
RetCode: 0
Status: OK
CheckDir: logicFS.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.4-bioc/meat/logicFS.Rcheck'
* using R version 2.9.2 Patched (2009-08-24 r49419)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'logicFS/DESCRIPTION' ... OK
* this is package 'logicFS' version '1.14.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'logicFS' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

logicFS.Rcheck/00install.out:

* Installing *source* package ‘logicFS’ ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: survival
Loading required package: splines
** help
*** installing help indices
 >>> Building/Updating help pages for package 'logicFS'
     Formats: text html latex example 
  data.logicfs                      text    html    latex
  getMatEval                        text    html    latex
  logic.bagging                     text    html    latex   example
  logic.oob                         text    html    latex
  logic.pimp                        text    html    latex
  logicFS-internal                  text    html    latex
  logicFS                           text    html    latex   example
  make.snp.dummy                    text    html    latex
  minDNF                            text    html    latex
  mlogreg                           text    html    latex
  plot.logicFS                      text    html    latex
  predict.logicBagg                 text    html    latex
  predict.mlogreg                   text    html    latex
  print.logicFS                     text    html    latex
  vim.chisq                         text    html    latex
  vim.ebam                          text    html    latex
  vim.individual                    text    html    latex
  vim.logicFS                       text    html    latex
  vim.norm                          text    html    latex
  vim.set                           text    html    latex
** building package indices ...
* DONE (logicFS)