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Package 106/319HostnameOS / ArchBUILDCHECKBUILD BIN
gcrma 2.16.0
Z. Wu
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/gcrma
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: gcrma
Version: 2.16.0
Command: E:\biocbld\bbs-2.4-bioc\R\bin\R.exe CMD build gcrma
StartedAt: 2009-10-20 14:09:34 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 14:09:51 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 17.0 seconds
RetCode: 0
Status: OK
PackageFile: gcrma_2.16.0.tar.gz
PackageFileSize: 105.3 KiB

Command output

* checking for file 'gcrma/DESCRIPTION' ... OK
* preparing 'gcrma':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'gcrma' ...
** libs
  making DLL ...
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c baseProfile.c -o baseProfile.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c computeAffinities.c -o computeAffinities.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c postmean.c -o postmean.o
gcc -shared -s -o gcrma.dll tmp.def baseProfile.o computeAffinities.o postmean.o -Le:/biocbld/bbs-2.4-bioc/R/bin -lR
  ... done
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: IRanges

Attaching package: 'IRanges'


	The following object(s) are masked from package:base :

	 cbind,
	 duplicated,
	 order,
	 pmax,
	 pmax.int,
	 pmin,
	 pmin.int,
	 rank,
	 rbind,
	 rep.int,
	 sapply,
	 sort,
	 table,
	 unique 

** help
*** installing help indices
 >>> Building/Updating help pages for package 'gcrma'
     Formats: text html latex example chm 
  affinity.spline.coefs             text    html    latex           chm
  bg.adjust.affinities              text    html    latex           chm
  bg.adjust.gcrma                   text    html    latex   example chm
  bg.parameters.ns                  text    html    latex           chm
  compute.affinities                text    html    latex           chm
  fast.bkg                          text    html    latex           chm
  gcrma                             text    html    latex   example chm
Note: removing empty section \examples in file 'gcrma.engine.Rd'
Note: removing empty section \examples in file 'gcrma.engine.Rd'
  gcrma.engine                      text    html    latex           chm
Note: removing empty section \examples in file 'gcrma.engine2.Rd'
Note: removing empty section \examples in file 'gcrma.engine2.Rd'
  gcrma.engine2                     text    html    latex           chm
  getCDF                            text    html    latex           chm
Note: removing empty section \examples in file 'justGCRMA.Rd'
Note: removing empty section \examples in file 'justGCRMA.Rd'
  justGCRMA                         text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.4-bioc\meat\gcrma\chm\gcrma.chm





Compile time: 0 minutes, 0 seconds

12	Topics

51	Local links

0	Internet links

1	Graphic





Created e:\biocbld\bbs-2.4-bioc\meat\gcrma\chm\gcrma.chm, 32,642 bytes

Compression decreased file by 24,821 bytes.

** building package indices ...
** MD5 sums
* DONE (gcrma)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'gcrma_2.16.0.tar.gz'