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Package 273/319HostnameOS / ArchBUILDCHECKBUILD BIN
SAGx 1.18.0
Per Broberg,
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/SAGx
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: SAGx
Version: 1.18.0
Command: E:\biocbld\bbs-2.4-bioc\R\bin\R.exe CMD build SAGx
StartedAt: 2009-10-20 14:52:48 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 14:53:15 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 27.5 seconds
RetCode: 0
Status: OK
PackageFile: SAGx_1.18.0.tar.gz
PackageFileSize: 204.1 KiB

Command output

* checking for file 'SAGx/DESCRIPTION' ... OK
* preparing 'SAGx':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'SAGx' ...
** libs
  making DLL ...
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c minigsea.c -o minigsea.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c newboot.c -o newboot.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c samrocNboot.c -o samrocNboot.o
gcc -shared -s -o SAGx.dll tmp.def minigsea.o newboot.o samrocNboot.o -Le:/biocbld/bbs-2.4-bioc/R/bin -lR
  ... done
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
 >>> Building/Updating help pages for package 'SAGx'
     Formats: text html latex example chm 
  Fstat                             text    html    latex   example chm
  GSEA.mean.t                       text    html    latex           chm
  JT.test                           text    html    latex   example chm
  R2BASE                            text    html    latex           chm
  R2mim                             text    html    latex           chm
  Xprep                             text    html    latex           chm
  Xprep.resid                       text    html    latex           chm
  clin2mim                          text    html    latex           chm
  cluster.q                         text    html    latex           chm
  estimatep0                        text    html    latex           chm
  fetchSignal                       text    html    latex   example chm
  firstpass                         text    html    latex   example chm
  fom                               text    html    latex           chm
  fp.fn                             text    html    latex           chm
  gap                               text    html    latex   example chm
  list.experiments                  text    html    latex   example chm
  list.intersection.p               text    html    latex           chm
  mat2TeX                           text    html    latex           chm
  myclus                            text    html    latex   example chm
  normalise                         text    html    latex           chm
  one.probeset.per.gene             text    html    latex           chm
  outlier                           text    html    latex   example chm
  p0.mom                            text    html    latex           chm
  pava.fdr                          text    html    latex           chm
  pava                              text    html    latex   example chm
  rank.genes                        text    html    latex           chm
  rank.trend                        text    html    latex   example chm
  rsd.test                          text    html    latex           chm
  samroc.result-class               text    html    latex           chm
  samrocn                           text    html    latex           chm
  samrocnboot                       text    html    latex   example chm
  union.of.pways                    text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.4-bioc\meat\SAGx\chm\SAGx.chm





Compile time: 0 minutes, 1 second

33	Topics

68	Local links

6	Internet links

1	Graphic





Created e:\biocbld\bbs-2.4-bioc\meat\SAGx\chm\SAGx.chm, 53,939 bytes

Compression decreased file by 39,098 bytes.

** building package indices ...
** MD5 sums
* DONE (SAGx)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'SAGx_1.18.0.tar.gz'