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Package 115/319HostnameOS / ArchBUILDCHECKBUILD BIN
GeneRfold 1.2.0
Antoine Lucas
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/GeneRfold
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 N O T   S U P P O R T E D
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]
Package: GeneRfold
Version: 1.2.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh GeneRfold_1.2.0.tar.gz /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R GeneRfold.buildbin-libdir
StartedAt: 2009-10-20 19:23:08 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 19:23:21 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 13.1 seconds
RetCode: 0
Status: OK
PackageFile: GeneRfold_1.2.0.tgz
PackageFileSize: 307.9 KiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --preclean --library=GeneRfold.buildbin-libdir GeneRfold_1.2.0.tar.gz'

* Installing *source* package ‘GeneRfold’ ...
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for main in -lRNA... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
** arch - i386
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include/  -fPIC -Wno-conversion -I/usr/local/include    -fPIC  -g -O2 -Wall -c viennaR.c -o viennaR.o
gcc-4.2 -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o GeneRfold.so viennaR.o -L/usr/local/lib/ -lRNA -fPIC -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading

Attaching package: 'GeneR'


	The following object(s) are masked from package:utils :

	 relist 

** help
*** installing help indices
 >>> Building/Updating help pages for package 'GeneRfold'
     Formats: text html latex example 
  fold                              text    html    latex   example
  rnaplot                           text    html    latex   example
** building package indices ...
* DONE (GeneRfold)

                INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --preclean --library=GeneRfold.buildbin-libdir --libs-only GeneRfold_1.2.0.tar.gz'

* Installing *source* package ‘GeneRfold’ ...
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for main in -lRNA... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
** arch - ppc
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include/  -fPIC -Wno-conversion -I/usr/local/include    -fPIC  -g -O2 -Wall -c viennaR.c -o viennaR.o
gcc-4.2 -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o GeneRfold.so viennaR.o -L/usr/local/lib/ -lRNA -fPIC -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
* DONE (GeneRfold)

                INSTALLATION OF x86_64 LIBS WITH 'R_ARCH=/x86_64 R CMD INSTALL --preclean --library=GeneRfold.buildbin-libdir --libs-only GeneRfold_1.2.0.tar.gz'

* Installing *source* package ‘GeneRfold’ ...
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for main in -lRNA... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
** arch - x86_64
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/x86_64 -I/usr/local/include/  -fPIC -Wno-conversion -I/usr/local/include    -fPIC  -g -O2 -Wall -c viennaR.c -o viennaR.o
gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o GeneRfold.so viennaR.o -L/usr/local/lib/ -lRNA -fPIC -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
* DONE (GeneRfold)