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Package 80/319HostnameOS / ArchBUILDCHECKBUILD BIN
DNAcopy 1.18.0
Venkatraman E. Seshan
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/DNAcopy
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: DNAcopy
Version: 1.18.0
Command: E:\biocbld\bbs-2.4-bioc\R\bin\R.exe CMD INSTALL --build --library=DNAcopy.buildbin-libdir DNAcopy_1.18.0.tar.gz
StartedAt: 2009-10-20 18:55:38 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 18:55:51 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 12.2 seconds
RetCode: 0
Status: OK
PackageFile: DNAcopy_1.18.0.zip
PackageFileSize: 393.3 KiB

Command output

* Installing *source* package 'DNAcopy' ...

  Using auto-selected zip options ''

** libs
  making DLL ...
gfortran     -O3  -c cbsWtstats.f -o cbsWtstats.o
gfortran     -O3  -c cbststats.f -o cbststats.o
gfortran     -O3  -c changepoints-wtd.f -o changepoints-wtd.o
gfortran     -O3  -c changepoints.f -o changepoints.o
gfortran     -O3  -c esegment.f -o esegment.o
gcc -I"E:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c flchoose.c -o flchoose.o
gcc -I"E:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c fphyper.c -o fphyper.o
gcc -I"E:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c fpnorm.c -o fpnorm.o
gfortran     -O3  -c getbdry.f -o getbdry.o
gfortran     -O3  -c prune.f -o prune.o
gcc -I"E:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c rshared.c -o rshared.o
gfortran     -O3  -c segmentp.f -o segmentp.o
gfortran     -O3  -c tailprobs.f -o tailprobs.o
gcc -shared -s -o DNAcopy.dll tmp.def cbsWtstats.o cbststats.o changepoints-wtd.o changepoints.o esegment.o flchoose.o fphyper.o fpnorm.o getbdry.o prune.o rshared.o segmentp.o tailprobs.o -lgfortran -LE:/biocbld/bbs-2.4-bioc/R/bin -lR
  ... done
** R
** data
**  moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'DNAcopy'
     Formats: text html latex example chm 
  CNA                               text    html    latex   example chm
  DNAcopy-internal                  text    html    latex           chm
  DNAcopy                           text    html    latex           chm
  coriell                           text    html    latex           chm
  cytoBand                          text    html    latex           chm
  exon.segment                      text    html    latex   example chm
  getbdry                           text    html    latex           chm
  plot.DNAcopy                      text    html    latex   example chm
  segment                           text    html    latex   example chm
  segments.p                        text    html    latex   example chm
  segments.summary                  text    html    latex   example chm
  smooth.CNA                        text    html    latex   example chm
  subset.CNA                        text    html    latex   example chm
  subset.DNAcopy                    text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.4-bioc\tmpdir\RtmpK3jAag\R.INSTALL678418be\DNAcopy\chm\DNAcopy.chm





Compile time: 0 minutes, 1 second

15	Topics

30	Local links

1	Internet link

1	Graphic





Created e:\biocbld\bbs-2.4-bioc\tmpdir\RtmpK3jAag\R.INSTALL678418be\DNAcopy\chm\DNAcopy.chm, 36,010 bytes

Compression decreased file by 15,718 bytes.

** building package indices ...
** MD5 sums
packaged installation of 'DNAcopy' as DNAcopy_1.18.0.zip
* DONE (DNAcopy)