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Package 42/319HostnameOS / ArchBUILDCHECKBUILD BIN
BiocCaseStudies 1.6.1
Biocore Team c/o BioC user list
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/BiocCaseStudies
Last Changed Rev: 42115 / Revision: 42512
Last Changed Date: 2009-10-01 17:02:59 -0700 (Thu, 01 Oct 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: BiocCaseStudies
Version: 1.6.1
Command: /home/biocbuild/bbs-2.4-bioc/R/bin/R CMD check --no-vignettes BiocCaseStudies_1.6.1.tar.gz
StartedAt: 2009-10-20 15:41:43 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 15:42:22 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 38.5 seconds
RetCode: 0
Status: OK
CheckDir: BiocCaseStudies.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.4-bioc/meat/BiocCaseStudies.Rcheck'
* using R version 2.9.2 (2009-08-24)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'BiocCaseStudies/DESCRIPTION' ... OK
* this is package 'BiocCaseStudies' version '1.6.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'BiocCaseStudies' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

BiocCaseStudies.Rcheck/00install.out:

* Installing *source* package 'BiocCaseStudies' ...
** R
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
 >>> Building/Updating help pages for package 'BiocCaseStudies'
     Formats: text html latex example 
  fixedWidthCat                     text    html    latex   example
  markup                            text    html    latex
  mySessionInfo                     text    html    latex
  parseLibVers                      text    html    latex
  requiredPackages                  text    html    latex   example
  resample                          text    html    latex
** building package indices ...
* DONE (BiocCaseStudies)