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Package 56/64HostnameOS / ArchBUILDCHECKBUILD BIN
SpikeInSubset 1.2.6
Rafael A. Irizarry
Snapshot Date: 2009-04-10 00:03:00 -0700 (Fri, 10 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/SpikeInSubset
Last Changed Rev: 474 / Revision: 760
Last Changed Date: 2007-09-18 17:49:34 -0700 (Tue, 18 Sep 2007)
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: SpikeInSubset
Version: 1.2.6
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes SpikeInSubset_1.2.6.tar.gz
StartedAt: 2009-04-10 02:44:07 -0700 (Fri, 10 Apr 2009)
EndedAt: 2009-04-10 02:45:09 -0700 (Fri, 10 Apr 2009)
EllapsedTime: 62.5 seconds
RetCode: 0
Status: OK
CheckDir: SpikeInSubset.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-data-experiment/meat/SpikeInSubset.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'SpikeInSubset/DESCRIPTION' ... OK
* this is package 'SpikeInSubset' version '1.2.6'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'SpikeInSubset' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... NOTE
  
  Welcome to Bioconductor
  
    Vignettes contain introductory material. To view, type
    'openVignette()'. To cite Bioconductor, see
    'citation("Biobase")' and for packages 'citation(pkgname)'.
  
Portable packages use only ASCII characters in their datasets.
* creating SpikeInSubset-Ex.R ... OK
* checking examples ... OK
* creating SpikeInSubset-manual.tex ... OK
* checking SpikeInSubset-manual.tex using pdflatex ... OK

SpikeInSubset.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-data-experiment/meat/SpikeInSubset.Rcheck


---------- Making package SpikeInSubset ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing data files
  preparing package SpikeInSubset for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
  installing man source files
  installing indices
Loading required package: methods
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'SpikeInSubset'
     Formats: text html latex example chm 
  SpikeIn                           text    html    latex           chm
  xhyb                              text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-data-experiment\meat\SpikeInSubset.Rcheck\00_pkg_src\SpikeInSubset\chm\SpikeInSubset.chm


Compile time: 0 minutes, 0 seconds
3	Topics
11	Local links
1	Internet link
1	Graphic


Created e:\biocbld\bbs-2.3-data-experiment\meat\SpikeInSubset.Rcheck\00_pkg_src\SpikeInSubset\chm\SpikeInSubset.chm, 17,738 bytes
Compression increased file by 6,072 bytes.
  adding MD5 sums

* DONE (SpikeInSubset)