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Package 5/64HostnameOS / ArchBUILDCHECKBUILD BIN
AmpAffyExample 1.2.2
Rafael A. Irizarry
Snapshot Date: 2009-04-10 00:03:00 -0700 (Fri, 10 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/AmpAffyExample
Last Changed Rev: 298 / Revision: 760
Last Changed Date: 2007-05-13 22:20:57 -0700 (Sun, 13 May 2007)
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: AmpAffyExample
Version: 1.2.2
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes AmpAffyExample_1.2.2.tar.gz
StartedAt: 2009-04-10 02:01:03 -0700 (Fri, 10 Apr 2009)
EndedAt: 2009-04-10 02:01:49 -0700 (Fri, 10 Apr 2009)
EllapsedTime: 45.7 seconds
RetCode: 0
Status: OK
CheckDir: AmpAffyExample.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-data-experiment/meat/AmpAffyExample.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'AmpAffyExample/DESCRIPTION' ... OK
* this is package 'AmpAffyExample' version '1.2.2'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'AmpAffyExample' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating AmpAffyExample-Ex.R ... OK
* checking examples ... OK
* creating AmpAffyExample-manual.tex ... OK
* checking AmpAffyExample-manual.tex using pdflatex ... OK

AmpAffyExample.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-data-experiment/meat/AmpAffyExample.Rcheck


---------- Making package AmpAffyExample ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing data files
  preparing package AmpAffyExample for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'AmpAffyExample'
     Formats: text html latex example chm 
  AmpData                           text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-data-experiment\meat\AmpAffyExample.Rcheck\00_pkg_src\AmpAffyExample\chm\AmpAffyExample.chm


Compile time: 0 minutes, 0 seconds
2	Topics
2	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.3-data-experiment\meat\AmpAffyExample.Rcheck\00_pkg_src\AmpAffyExample\chm\AmpAffyExample.chm, 15,767 bytes
Compression increased file by 8,781 bytes.
  adding MD5 sums

* DONE (AmpAffyExample)