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Package 281/294HostnameOS / ArchBUILDCHECKBUILD BIN
topGO 1.10.1
Adrian Alexa
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/topGO
Last Changed Rev: 35382 / Revision: 38965
Last Changed Date: 2008-11-17 14:19:26 -0800 (Mon, 17 Nov 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  WARNINGS [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  WARNINGS  OK 
Package: topGO
Version: 1.10.1
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD INSTALL --build --library=topGO.buildbin-libdir topGO_1.10.1.tar.gz
StartedAt: 2009-04-18 20:57:03 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 20:57:26 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 23.5 seconds
RetCode: 0
Status: OK
PackageFile: topGO_1.10.1.zip
PackageFileSize: 617.7 KiB

Command output

installing R.css in E:/biocbld/bbs-2.3-bioc/meat/topGO.buildbin-libdir

Using auto-selected zip options 'topGO-ZIPDATA=zip topGO-HELP=ziponly'

---------- Making package topGO ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  preparing package topGO for lazy loading
Loading required package: graph
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: GO.db
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: SparseM

Attaching package: 'SparseM'


	The following object(s) are masked from package:stats :

	 model.response 


	The following object(s) are masked from package:base :

	 backsolve,
	 chol 

Creating a new generic function for "print" in "topGO"
  installing man source files
  installing indices
  zipping data
  installing help
 >>> Building/Updating help pages for package 'topGO'
     Formats: text html latex example chm 
  GOFisherTest                      text    html    latex           chm
  GOKSTest                          text    html    latex           chm
  GOdata                            text    html    latex   example chm
  GOglobalTest                      text    html    latex           chm
  annFUN                            text    html    latex   example chm
  buildGOgraph.topology             text    html    latex           chm
  buildLevels                       text    html    latex   example chm
  classicCount-class                text    html    latex   example chm
  classicExpr-class                 text    html    latex   example chm
  classicScore-class                text    html    latex   example chm
  elimCount-class                   text    html    latex   example chm
  elimExpr-class                    text    html    latex   example chm
  elimScore-class                   text    html    latex   example chm
  getPvalues                        text    html    latex   example chm
  getSigGroups                      text    html    latex   example chm
  groupGOTerms                      text    html    latex   example chm
  groupStats-class                  text    html    latex   example chm
  inducedGraph                      text    html    latex   example chm
  mapGenes2GOgraph                  text    html    latex   example chm
  parentChild-class                 text    html    latex   example chm
  printGenes-methods                text    html    latex           chm
  printGraph-methods                text    html    latex   example chm
  reverseArch                       text    html    latex   example chm
  topGO-package                     text    html    latex           chm
  topGOdata-class                   text    html    latex   example chm
  topGOresult-class                 text    html    latex           chm
  weightCount-class                 text    html    latex   example chm
  weightScore-class                 text    html    latex           chm
  zipping help files
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.3-bioc\meat\R.INSTALL.1564\topGO\chm\topGO.chm





Compile time: 0 minutes, 1 second

29	Topics

420	Local links

0	Internet links

1	Graphic





Created e:\biocbld\bbs-2.3-bioc\meat\R.INSTALL.1564\topGO\chm\topGO.chm, 48,476 bytes

Compression decreased file by 137,901 bytes.

  adding MD5 sums

packaged installation of package 'topGO' as topGO_1.10.1.zip
* DONE (topGO)