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Package 195/294HostnameOS / ArchBUILDCHECKBUILD BIN
ontoTools 1.20.0
Vince Carey
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/ontoTools
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK [ OK ]
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: ontoTools
Version: 1.20.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh ontoTools_1.20.0.tar.gz /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R ontoTools.buildbin-libdir
StartedAt: 2009-04-18 18:33:00 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 18:33:14 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 14.5 seconds
RetCode: 0
Status: OK
PackageFile: ontoTools_1.20.0.tgz
PackageFileSize: 3.508 MiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --library=ontoTools.buildbin-libdir ontoTools_1.20.0.tar.gz'

* Installing *source* package 'ontoTools' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: graph
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: AnnotationDbi
Loading required package: SparseM
Package SparseM (0.79) loaded.  To cite, see citation("SparseM")

Attaching package: 'SparseM'


	The following object(s) are masked from package:stats :

	 model.response 


	The following object(s) are masked from package:base :

	 backsolve,
	 chol 

Loading required package: GO.db
Loading required package: DBI
Loading required package: annotate
Loading required package: xtable
Creating a new generic function for "grep" in "ontoTools"
** help
 >>> Building/Updating help pages for package 'ontoTools'
     Formats: text html latex example 
Note: removing empty section \references in file 'A.csr.Rd'
  A.csr                             text    html    latex
Note: removing empty section \value in file 'GDI.Rd'
Note: removing empty section \references in file 'GDI.Rd'
  GDI                               text    html    latex   example
  LLGOMFcp                          text    html    latex
  OOC-class                         text    html    latex   example
Note: removing empty section \references in file 'SGDIvocab.Rd'
  SGDIvocab                         text    html    latex   example
Note: removing empty section \value in file 'STMA.Rd'
Note: removing empty section \details in file 'STMA.Rd'
Note: removing empty section \references in file 'STMA.Rd'
  STMA                              text    html    latex   example
Note: removing empty section \details in file 'accessMat.Rd'
Note: removing empty section \examples in file 'accessMat.Rd'
  accessMat                         text    html    latex
  buildGOgraph                      text    html    latex   example
Note: removing empty section \examples in file 'compoundGraph-class.Rd'
  compoundGraph-class               text    html    latex
  depthStruct                       text    html    latex   example
  gomfAmat                          text    html    latex
Note: removing empty section \source in file 'litOnto.Rd'
Note: removing empty section \references in file 'litOnto.Rd'
  litOnto                           text    html    latex
  namedSparse-class                 text    html    latex   example
  ontology-class                    text    html    latex   example
Note: removing empty section \references in file 'ooMapLL2GOMFdemo.Rd'
  ooMapLL2GOMFdemo                  text    html    latex
  otkvEnv2namedSparse               text    html    latex   example
Note: removing empty section \examples in file 'rootedDAG-class.Rd'
  rootedDAG-class                   text    html    latex
  semsim                            text    html    latex   example
Note: removing empty section \references in file 'taggedHierNomenclature-class.Rd'
  taggedHierNomenclature-class      text    html    latex   example
  toDot-methods                     text    html    latex   example
** building package indices ...
* DONE (ontoTools)